Cebus imitator (Panamanian white-faced capuchin): 108312519
Help
Entry
108312519 CDS
T08783
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi00100
Steroid biosynthesis
cimi01100
Metabolic pathways
Module
cimi_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
108312519 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cimi01006
]
108312519 (FDFT1)
Enzymes [BR:
cimi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
108312519 (FDFT1)
Prenyltransferases [BR:
cimi01006
]
Terpene biosynthesis
Squalene/phytoene synthase
108312519 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Octopine_DH
Motif
Other DBs
NCBI-GeneID:
108312519
NCBI-ProteinID:
XP_017395965
Ensembl:
ENSCCAG00000027339
UniProt:
A0A2K5QSX9
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MAAAACGTKAMALFKRTLVLSPAAAPRGPGAGTAPRGCSLPPAAWPCKDWPRGEGCRLWS
RLPQSHSHSCSSTSPSAVCLVCPQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMRNAV
CIFYLVLRALDTLEDDMTLSVEKKVPLLHNFHSFLYQPDWRFTESKEKDRQVLEDFPTIS
LEFRNLAEKYQTVIADICRRMGIGMAEFLNKHVTSEQEWDKYCHYVAGLVGIGLSRLFSA
SEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQEGREFWPQEVWSRYVKKLGDFAKP
ENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLAACYNNQQV
FKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQIISTIRTQ
NLPNCQLISRSHYSPIYLSFVMLLAALSWQYLTTLSQVTEDYVQTGEH
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagccgcctgcggcacgaaagccatggccctcttcaagcgcaccctggtgctg
agtcccgccgcggcacccagaggcccgggcgcaggcaccgccccgcggggctgctctttg
cctcctgccgcctggccctgcaaggactggccgcggggagagggctgcaggctgtggagc
cgcctgccccagtcccactcccactcctgctcctcaacgtctcccagcgccgtgtgtctt
gtctgcccgcaggactcgctcagcagtagcctgaaaacttgctacaaatatctcaatcag
acgagtcgcagtttcgcagctgttatccaggcgctggatggggaaatgcgcaatgctgtg
tgcatattttatctggtcctccgagctctggacacgctggaagatgacatgaccctcagt
gtggaaaagaaggtcccgctgttacacaacttccactccttcctttaccagccagactgg
cggttcacggagagcaaggagaaggaccgccaggtgctggaggacttcccaacgatctcc
ctcgagtttagaaatctggctgagaaataccaaacggtgattgctgacatttgccggaga
atgggaattgggatggcagagtttttgaacaagcacgtgacctctgaacaggagtgggac
aagtactgccactatgttgctgggctggtaggaattggcctttcccgtctcttctcggcc
tcggagttcgaagaccccttagttggtgaagatacagaacgtgccaactctatgggcctg
tttctgcagaaaacaaacatcattcgtgactatctggaagaccagcaagaaggaagagag
ttttggcctcaagaggtttggagcaggtatgttaagaagttgggggattttgctaagccg
gagaatattgacttggccgtgcagtgcctgaatgagcttataaccaatgcactgcatcac
atcccagatgtcatcacctacctgtcaagactcagaaaccagagtgtgtttaacttctgt
gctattccacaggtgatggccattgccactttggctgcctgttacaataatcagcaggtg
ttcaaaggggtagtgaagattcggaaagggcaagcagtgaccctgatgatggatgccacc
aatatgccagctgtcaaagccatcatatatcagtatatggaagagatttaccatagaatc
cctgactcagacccatcttccagtaaaacgaggcagatcatctccaccatccggacgcag
aatcttcccaactgtcagctgatctcccgaagccactactcccccatctatctgtccttt
gtcatgctcttggccgccctgagctggcagtacctgaccacactctcccaggtcacggaa
gactatgttcagactggagaacactga
DBGET
integrated database retrieval system
