Cebus imitator (Panamanian white-faced capuchin): 108313317
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Entry
108313317 CDS
T08783
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X3
KO
K07466
replication factor A1
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03030
DNA replication
cimi03420
Nucleotide excision repair
cimi03430
Mismatch repair
cimi03440
Homologous recombination
cimi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108313317 (RPA1)
03420 Nucleotide excision repair
108313317 (RPA1)
03430 Mismatch repair
108313317 (RPA1)
03440 Homologous recombination
108313317 (RPA1)
03460 Fanconi anemia pathway
108313317 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cimi03000
]
108313317 (RPA1)
03032 DNA replication proteins [BR:
cimi03032
]
108313317 (RPA1)
03400 DNA repair and recombination proteins [BR:
cimi03400
]
108313317 (RPA1)
Transcription factors [BR:
cimi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108313317 (RPA1)
DNA replication proteins [BR:
cimi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
108313317 (RPA1)
DNA repair and recombination proteins [BR:
cimi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
108313317 (RPA1)
MMR (mismatch excision repair)
108313317 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
108313317 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REPA_OB_2
Rep-A_N
Rep_fac-A_C
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
108313317
NCBI-ProteinID:
XP_017397139
Ensembl:
ENSCCAG00000010981
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MVGQLSEGAIAVIMQQQDTFIKPILQVINIRPITTGNSPPRYRLLMSDGVNTLSSFMLAT
QLNTLVEQGQLASNCVCQINRFIVNTLKDGRRVVILMELEVLKSAEAVGVKIGNPVPYNE
GHGQQQVAPPPVPAASPASSKPQPQNGSSGVGSTVPKAYGASKTFGKAGGPSLSSTSAGT
QAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESGEIRATAFNE
QVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDDRHLPTVQF
DFTGIDNLENKSKDSLVDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTATL
WGEDADKFDGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIVNPDIPEAYKLRGWFDSEGQ
ALDGVSISDLKSGGLGGSNTNWKTLYEVKSENLGQGDKVNIADFQENQWVTCFQESAEAI
LGQNAAYLGELKDKNEQAFEEVFQNANFRSFIFKVRVKVETYNDESRIKATVMDVKPVDY
REYGRRLVQSIRRNASM
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggtcggccaactgagcgagggggccattgcggtcataatgcagcagcaggatacattc
atcaaacccatcctccaagtcatcaacatccgtcccatcaccacagggaacagtccgcca
cgttatcgactgctcatgagtgatggagtgaacactctgtcatctttcatgttggccaca
cagttgaacactcttgttgagcaaggacaattggccagcaactgcgtttgccagattaac
cgattcattgtgaacaccctgaaagacggaaggagagtagttattttgatggaattagaa
gttttgaaatcagccgaagcagttggagtaaagattggcaatccagtgccctacaatgaa
ggacatgggcagcagcaggtagctcctcctccagttccagctgccagcccagcgagcagc
aagccccagccacagaatggaagctctggagtgggttccactgttcctaaggcttatggt
gcgtcaaagacatttggaaaagctggaggtcccagcctgtccagcacttccgcgggaaca
caggccaaagtggtgcccattgccagccttaccccttaccagtccaagtggacgatttgt
gctcgtgtcaccaacaaaagtcagatccgtacctggagcaactcccgaggggaagggaag
ctgttctctctagagctagttgatgaaagtggtgaaatcagagctacagctttcaatgag
caagtggacaagttctttcccctcattgaagtgaacaaggtatattatttctcaaaaggc
accctgaagattgctaacaaacaattcacagctgttaaaaatgactatgagatgaccttt
aataatgagacttctgtcatgccctgtgaagatgatcgtcacttgcctaccgttcagttt
gatttcacagggattgataacctagagaacaagtctaaagactcacttgttgacataatt
gggatctgcaagagctatgaagatgccactaaaatcacagtgaggtctaacaacagagag
gttgctaagaggaatatctacttgatggacacatcggggaaggtggtgactgctacgctg
tggggggaagatgctgataaatttgatggttccagacagcccgtgctggctatcaaagga
gccagagtctctgattttggtggacggagcctctccgtgctgtcttccagcacaatcatc
gtcaatcctgacatcccagaggcctataagcttcgtggatggtttgactcagaaggacaa
gccttagatggcgtttccatctctgacctaaagagcggtggacttggagggagtaacacc
aactggaaaaccttgtatgaggtcaaatcagagaacctgggccaaggcgacaaggtaaat
attgcagattttcaagagaatcagtgggtgacttgtttccaggagtctgctgaagctatc
cttggacaaaatgctgcctatcttggagaattaaaagacaagaatgaacaggcgtttgaa
gaagtttttcagaatgccaacttccgatccttcatattcaaagtcagggtcaaagtagag
acctacaatgacgagtctcgaattaaggccactgtgatggatgtgaagcctgtggactac
agagagtatggcagaaggctggtccagagcatccggagaaacgcatccatgtga
DBGET
integrated database retrieval system
