Cebus imitator (Panamanian white-faced capuchin): 108313602
Help
Entry
108313602 CDS
T08783
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter isoform X1
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi04082
Neuroactive ligand signaling
cimi04721
Synaptic vesicle cycle
cimi04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
108313602 (SLC6A4)
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
108313602 (SLC6A4)
04721 Synaptic vesicle cycle
108313602 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cimi02000
]
108313602 (SLC6A4)
Transporters [BR:
cimi02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
108313602 (SLC6A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
108313602
NCBI-ProteinID:
XP_017397518
Ensembl:
ENSCCAG00000024873
UniProt:
A0A2K5QDY8
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
METTPLNSQKQLSACKDGEDCQENGVLQKGVPTPGDKLESGQISNGYSAVPSPGAGDDTR
HPIQAAATTLVAELHQGERETWGKKVDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAVFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIM
AWALYYLISSFTDQLPWTSCKNSWNTGNCTNYFSEDNITWTLHSTSPAEEFYTRHVLQIH
RSKGLQDLGGISWQLTLCIMLIFTVIYFSIWKGVKTSGKVVWVTATFPYIILSVLLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWIDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWAKRRERFVLAVVITCFFGSLVT
LTFGGAYVVKLLEEYATGPAVLTVALIEAVAVSWFYGITQFCRDVKEMLGFSPGWFWRIC
WVAISPLFLLFIICSFLMSPPQLRLFQYNYPHWSVILGYCIGTSSFICIPTYIAYRLIIT
PGTFKERIIKSITPETPTEIPCGDIRLSAV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacgcccttaaactctcagaaacagctatcagcatgtaaggatggagaagat
tgtcaggaaaacggagttctgcagaagggtgtccccaccccaggggacaaattggaatct
gggcaaatatctaatggatactcagcggttccaagccctggtgcgggagacgacacgagg
caccctatccaggcggccgccaccaccctagtggctgagcttcatcaaggggaacgggag
acctggggcaagaaggtggatttcctcctctcagtcattggctatgctgtggacctgggc
aacgtctggcgcttcccctacatatgttaccagaatggagggggggcattcctcctcccc
tacaccatcatggccgttttcgggggcatcccgctattttacatggagctcgcgctggga
cagtaccaccgaaacggatgcatttccatatggaggaaaatctgcccgattttcaaaggg
attggctacgccatctgcatcattgccttctacatcgcctcctactacaacaccatcatg
gcctgggcgctctactacctcatctcctccttcacggaccagctgccctggaccagctgc
aagaactcctggaacactggcaactgcaccaattacttctctgaggacaacatcacctgg
accctccattccacgtcccctgctgaagaattttacacgcgccacgttctgcagatccac
cggtctaaggggctccaggacctggggggcatcagctggcagctgaccctctgcatcatg
ctgatcttcactgttatctacttcagcatctggaaaggcgtcaagacctctggcaaggtg
gtatgggtgacagccaccttcccttatatcatcctttctgtcctgctggtgaggggtgcc
accctccctggagcctggaggggtgttctcttctacttgaaacctaactggcagaaactc
ctggagaccggggtgtggatagatgctgccgctcagatcttcttctctcttggtccgggc
tttggggtccttctggcttttgctagctacaacaagttcaacaacaactgctaccaagat
gcgctggtgaccagcgtggtgaactgcatgacgagcttcgtttcgggatttgtcatcttc
acggtgctcggctacatggctgagatgaggaatgaagatgtgtctgaggtggccaaagat
gcaggtcccagcctcctcttcatcacctatgcagaagcgatagccaacatgccagcgtcc
actttctttgccatcatcttctttctgatgctgatcacgctgggcttagacagcacgttt
gcaggcttggagggggtgatcacagctgtgctggatgagttcccacacatctgggccaag
cgccgggagcggtttgtgctcgccgtggtcatcacctgcttctttggatccctggtcacc
ctgacatttggaggggcctacgtggtgaagctgctggaggagtatgccaccgggcccgca
gtgctcactgtggccctgatcgaggcagttgctgtgtcttggttctacggcatcactcag
ttctgcagggacgtgaaggaaatgctcggcttcagcccggggtggttctggaggatctgc
tgggtggccatcagccctctgtttctcctgttcatcatttgcagttttctgatgagccca
ccacagctacgacttttccaatataattatccccactggagtgtcatcttgggttactgc
ataggaacttcatctttcatctgcatccccacatacattgcttatcggctgatcatcact
ccagggacatttaaggagcgtattattaaaagtatcaccccagaaacaccaacagaaatt
ccttgtggggacatccgcttgagcgctgtgtaa
DBGET
integrated database retrieval system
