Cebus imitator (Panamanian white-faced capuchin): 108314781
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Entry
108314781 CDS
T08783
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cimi03016
]
108314781 (TRUB1)
Enzymes [BR:
cimi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
108314781 (TRUB1)
Transfer RNA biogenesis [BR:
cimi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
108314781 (TRUB1)
Prokaryotic type
108314781 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
108314781
NCBI-ProteinID:
XP_017399300
Ensembl:
ENSCCAG00000028842
UniProt:
A0A2K5R1Q0
LinkDB
All DBs
Position
Unknown
AA seq
351 aa
AA seq
DB search
MAASEVPVVVSSSSLKTDTSPVLETAGAVAAMAATPPATAAAAAVAAAARTGSEARISKA
ALATKLLSLSGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWSKRKKQTLKIGHGGT
LDSAARGVLVVGIGRGTKMLTSMLSGSKRYIAIGELGKATDTLDSTGKVTEEKPYDKITQ
EDIEGILQKFTGNIMQVPPLYSALKKDGQRLSTLMKRGEVVEAKPARPVTVYSISLQKFQ
PPFFTLDVECGGGFYIRSLVSDIGKELSSCANVLELTRTKQGPFTLEEHALPEDKWTIDD
IAQSLEHCSSLFPAELALKKSKPEKSNEQVLSCEHITLNEPKGEDDVIKTC
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttctgaggtgccggtggtggtgtcttcgtcgtctttgaaaacagacacatcc
cctgtccttgaaactgcaggagcggtcgcagcaatggctgcgaccccgccagcaacagct
gcagccgcggctgttgcggccgcggccaggacaggatccgaagccaggatctccaaggcc
gctttggctacaaagctgctgtccctgagcggcgtgttcgccgtacacaagcccaaaggg
cccacttcagccgagctgctgaatcggttgaaggagaagctgctggcagaagctggaatg
ccttctccagaatggagcaagaggaaaaagcagactttgaaaattgggcatggagggact
ctagacagcgcagcccgaggagttctggtggttggaattggaaggggaacaaaaatgctg
accagtatgttgtcagggtccaagagatacattgccattggagaactggggaaagctact
gatacactcgattctacggggaaagtaacagaagaaaaaccttacgataaaataacacaa
gaagatattgaaggcattctacagaaatttactgggaatataatgcaagtgccccccctc
tattctgcattaaagaaagatggacagagactttcaactttgatgaagagaggtgaagtc
gtagaagcaaaacctgccaggccagtgactgtatacagtatctcccttcagaaattccag
ccaccatttttcacattagatgttgaatgtggaggaggtttttatatcagaagcttggtc
agtgacattggaaaagaactgtcttcctgtgccaatgtgctagagctgacccgaacgaaa
caggggccatttacgctagaagagcatgcccttcctgaagataaatggacaattgatgac
attgcacagtctcttgagcattgctcatctcttttcccagcagagttggcacttaaaaaa
tcaaaacctgagaagtctaatgaacaggttttgagctgtgaacatataactctaaatgag
ccaaagggagaagatgatgtaattaagacgtgttga
DBGET
integrated database retrieval system
