Cebus imitator (Panamanian white-faced capuchin): 108316080
Help
Entry
108316080 CDS
T08783
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03082
ATP-dependent chromatin remodeling
cimi04714
Thermogenesis
cimi05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108316080 (SMARCD1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
108316080 (SMARCD1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
108316080 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cimi03021
]
108316080 (SMARCD1)
03036 Chromosome and associated proteins [BR:
cimi03036
]
108316080 (SMARCD1)
Transcription machinery [BR:
cimi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108316080 (SMARCD1)
Chromosome and associated proteins [BR:
cimi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108316080 (SMARCD1)
PBAF complex
108316080 (SMARCD1)
GBAF(ncBAF) complex
108316080 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
108316080
NCBI-ProteinID:
XP_017401308
Ensembl:
ENSCCAG00000033779
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MAARAGFQSVAPSGGAGASGGAGAAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPR
PGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRN
HNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPR
LARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAE
FYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccgggcgggtttccagtctgtggctcccagcggcggcgccggagcctcagga
ggggcgggcgcggctgctgccttgggcccaggcggaactccggggcctccagtgcgaatg
ggcccggctccgggtcaagggctgtaccgctccccgatgcctggagcggcctatccgaga
cccggtatgctgccaggcagccgaatgacacctcagggaccttccatggggcctcctggc
tatggggggaacccttcagtccgacctggcctggcccagtcagggatggaccagtcccgc
aagaggcctgcccctcagcagatccagcaggtccagcagcaggcggtccaaaatcgaaac
cacaatgcaaagaaaaagaagatggctgacaaaattctacctcaaaggattcgtgaactg
gtaccagaatcccaggcctacatggatctcttggcttttgaaaggaaactggaccagact
atcatgaggaaacggctagatatccaagaggccttgaaacgtcctatcaagcaaaaacgg
aagctgcgaattttcatttctaacactttcaatccggctaagtcagatgccgaggatggg
gaagggacggtggcttcctgggagcttcgggtagaaggacggctcctggaggattcagcc
ttgtccaaatatgatgccactaaacaaaagaggaagttctcttctttttttaagtccttg
gtgattgaactggacaaagacctgtatgggccagacaaccatctggtagaatggcacagg
accgccactacccaggagaccgatggctttcaggtgaagcgaccaggagacgtgaatgta
cgatgtactgtcctactgatgctggattaccagcctccccagtttaaattagacccccgc
ctagctcggcttctgggcatccacacccagactcgtccagtgatcatccaagcactgtgg
caatatattaagacacataagctccaggatcctcatgagcgggagtttgtcatctgtgac
aagtacctgcagcagatctttgagtctcaacgtatgaagttttcagagatccctcagcgg
ctccatgccttgcttatgccaccagaacctatcatcattaatcatgtcatcagtgttgac
ccgaatgaccagaaaaagacagcttgttatgacattgatgttgaagtggatgacaccttg
aagacccagatgaattcttttctgctgtccactgccagccaacaggagatcgctactcta
gacaacaagatccatgagacaatagaaaccatcaaccagctgaagactcagcgggagttc
atgctgagctttgccagagaccctcagggtttcatcaatgactggcttcagtcccagtgc
agggacctcaagacaatgactgatgtggtgggtaacccagaggaggagcgccgagctgag
ttctacttccagccctgggctcaggaggccgtgtgtcgatatttctactccaaggtgcag
cagagacgacaagaattagagcaagccctgggaatccggaatacatag
DBGET
integrated database retrieval system
