Cebus imitator (Panamanian white-faced capuchin): 108316831
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Entry
108316831 CDS
T08783
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108316831 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cimi03019
]
108316831 (CPSF2)
Messenger RNA biogenesis [BR:
cimi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108316831 (CPSF2)
U7-dependent histone pre-mRNA processing factors
108316831 (CPSF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
108316831
NCBI-ProteinID:
XP_017402455
Ensembl:
ENSCCAG00000028088
UniProt:
A0A2K5QXA1
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLL
SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTT
PGTLARFLIDNPSEKITEIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDIEEDIDQPSAHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDVPTKCISTTESIEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDS
EMQVDAPSDASVIAQQKAMKSLFGDDEKETGEESEIIPTLEPLPPHEVPGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacatctattatcaaattaactaccctttctggggtccaagaagaatctgccctttgc
tatcttctccaagttgatgagtttagatttttattggactgtggctgggatgaacacttt
tctatggatattatagattccctgaggaagcatgttcaccagattgatgctgtactgttg
tctcaccccgatcctctccaccttggtgccctcccgtatgctgttggaaagttgggtctg
aactgtgctatctatgcaaccattcctgtttataaaatgggacagatgttcatgtatgat
ctttatcagtctcgacacaatacagaagattttacgctctttacgttagacgatgtggat
gcagcctttgataaaatacagcagctaaaattctctcaaattgtaaatttgaaaggtaaa
ggacatggcctgtctatcacacctctgccagccggtcatatgataggtggaacaatatgg
aaaatagtcaaagatggagaagaagaaattgtttatgcagttgactttaaccacaagagg
gagatccatttaaatggatgttccctggaaatgctaagcaggccctccttacttatcaca
gattcatttaatgctacatatgtgcagcctagaagaaaacagagagatgagcagcttctg
acaaatgtcctggaaacacttcgaggtgatggaaatgttttaatagcagtggacacggca
ggcagagttttggaacttgctcaacttctggatcagatttggagaactaaagatgcagga
ctgggtgtttactcattggcactcctgaataacgtcagttataatgtggtggagttttct
aagtcccaggtagaatggatgagtgataaattgatgagatgttttgaagacaaaagaaat
aatccgtttcagtttcgccatctctctttatgtcatggtctttccgacttggcccgggta
cctagccctaaagttgtacttgccagccaacctgacctggaatgtggattttcaagggat
ctctttattcagtggtgtcaggaccctaaaaactcaatcatcctaacttacagaactact
cctggcactttagcacgtttcctaattgataacccttctgaaaaaattacagaaatagag
ctgaggaaacgtgtgaagcttgaagggaaagaacttgaggaatacttggaaaaagagaaa
ctgaagaaagaagctgctaaaaagcttgagcagtcgaaagaggcagatatagattccagt
gatgagagtgacattgaggaagatattgaccagccatcagctcataagacgaagcatgac
ttgatgatgaaaggtgaaggcagtcgtaaaggaagttttttcaaacaggcaaaaaagtct
tatcctatgtttcctgccccagaagaaagaattaaatgggatgaatatggagagattatc
aaaccagaggatttcttggtgccagagcttcaagctactgaagaagaaaaaagcaaatta
gaatctggtttgacaaatggagatgaacccatggatcaggatttatctgatgttcctact
aaatgtatttctacaacagagtctattgaaataaaagcccgtgttacctacatagactat
gaaggacgctctgatggggattccattaaaaaaatcattaatcagatgaaaccacgacag
ttgatcatcgtccatggcccaccagaggccagtcaagatctggcagagtgctgtcgtgcc
tttggtgggaaagatattaaagtgtacatgccaaagctacatgaaaccgttgatgccact
agtgaaactcacatctaccaggtgagattaaaagactcacttgtcagctctcttcagttt
tgtaaggcaaaagatgctgaattggcttggatagatggtgtcttagatatgagagtttcc
aaagtggacacaggggttattttagaagaaggagaactaaaggatgatggagaagactca
gaaatgcaagtggatgctccctcagatgccagcgttatagcgcaacaaaaggccatgaaa
agtctgttcggagatgatgaaaaagaaacaggtgaagaaagtgagatcattcctactttg
gaacccttgccacctcatgaggttcccggacatcagtcagtttttatgaatgaaccaaga
ctgtcagacttcaaacaagttcttttacgggaaggaattcaagctgaatttgtaggaggt
gtacttgtttgcaacaatcaagtagcagtccgtcgaacggaaactggacgcattggatta
gaaggctgcctttgtcaagatttttataggataagagaccttttatatgaacaatatgcc
attgtgtaa
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