Cebus imitator (Panamanian white-faced capuchin): 108317756
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Entry
108317756 CDS
T08783
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108317756 (WDR33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cimi03019
]
108317756 (WDR33)
Messenger RNA biogenesis [BR:
cimi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108317756 (WDR33)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
ASA1
Beta-prop_WDR90_POC16_2nd
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
CFAP251_N
Beta-prop_EIPR1
Collagen
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_Vps41
eIF2A
WD40_RFWD3
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
108317756
NCBI-ProteinID:
XP_017403917
Ensembl:
ENSCCAG00000031522
UniProt:
A0A2K5RHG6
LinkDB
All DBs
Position
Unknown
AA seq
1336 aa
AA seq
DB search
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDESNEIEMTIPGLDWGMEE
VMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPNEVLNDRKEDIKLEEKKKTQAE
IEQEMATLQYTNPQLLEQLKIERLAQKQVEQIQPPPSSGTPLLGPQPFQGQGPMSQIPQG
FQQPHPSQQMPMNMAQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGGGGPQGFMGPQGPQG
PPQGLPRPQDMHGPQGMQRHPGPHGPLGPQGPPGPQGSSGPQGHMGPQGPPGPQGHIGPQ
GPPGPQGHLGPQGPPGTQGMQGPPGPRGMQGPPHPHGIQGGPGSQGIQGPVSQGPLMGLN
PRGMQGPPGPRENQGPAPQGMMMGHPPQEMRGPHPPSGLLGHGPQEMRGPQEIRGMQGPP
PQGSMLGPPQELRGPPGSQSQQGPPQGSLGPPPQGGMQGPPGPQGQQNPARGPHPSQGPI
PFQQQKTPLLGDGPRAPFNQEGQSAGPPPLIPGLGQQGAQGRIPPLNPGQGPGPNKGDSR
GPPNHHMGPMSERRHEQSGGPEHGPERGPFRGGQDCRGPPDRRGPHPDFPDDFNRPDDFH
PDKRFGHRLREFEGRGGPLPQEEKWRRGGPGPPFPPDHREFSEGDGRGAARGPPGAWEGR
RPGDERFPRDPEDPRFRGRREESFRRGAPPRHEGRAPPRGRDGFPGPEDFGPEENFDASE
EAARGRDLRGRGRGTPRGGRKGLLPTPDEFPRFEGGRKPDSWDGNREPGPGHEHFRDAPR
PDHPPHDGHSPASRERSSSLQGMDMASLPPRKRPWHDGPGTSEHREMEAPGGPSEDRGGK
GRGGPGPAQRVPKSGRSSSLDGEHHDGYHRDEPFGGPPGSGTPSRGGRSGSNWGRGSNMN
SGPPRRGASRGGGRGR
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atggctacagaaattggttctcctcctcgttttttccatatgccaaggttccaacaccag
gcacctcgacagctgttttataagcgacctgattttgcacaacagcaagcaatgcaacag
cttacctttgatggaaaacgaatgagaaaagctgtaaaccgaaaaaccatagactacaat
ccatctgtaattaagtatttggagaacagaatatggcaaagagaccagagagatatgcgg
gcaattcagcctgatgcaggttattacaatgatctggtcccacctataggaatgttgaat
aatccgatgaatgcagtaacaacaaaatttgttcggacatcaacaaataaagtaaaatgc
ccggtatttgttgttaggtggaccccagaaggaagacgcttggtcactggagcttctagt
ggggagttcaccttgtggaatggacttacttttaattttgaaacaatattacaggctcac
gacagcccagtgagggccatgacgtggtcacataatgacatgtggatgttgacagcagac
cacggaggatatgtgaaatattggcagtcgaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgatgacggcactgttagaatctgggactttcttcgttgccatgaggaaagaattctc
cgagggcatggtgctgatgtgaaatgtgtagactggcatccaaccaaagggttagttgtt
tcaggaagtaaagatagtcaacagccaatcaagttctgggatcccaagactgggcagagt
cttgcaacacttcatgcccataaaaacacagtaatggaagtgaaattaaatctcaatggc
aattggctgctcacagcatcacgtgaccatctctgtaaactttttgatatcagaaaccta
aaagaagagcttcaagtcttccgaggtcataagaaagaagccacagctgtggcctggcat
cctgttcatgaaggactttttgccagtggagggtctgatggttctttgttattctggcat
gttggggtagagaaggaagtgggtgggatggagatggctcacgaagggatgatctggagt
ctggcttggcatcctctcgggcatattctctgctcaggctccaatgaccatactagcaaa
ttctggactcgaaatcgaccaggtgataaaatgagagatcgatacaatctaaacctttta
cctggaatgtctgaagatggagtagaatatgatgaccttgaacctaatagcctggcagta
attccaggaatgggaataccagaacaactaaaattagcaatggaacaagaacagatgggg
aaagatgaatcaaatgaaattgaaatgacaattccaggcttagattggggaatggaggaa
gtgatgcaaaaggaccagaaaaaagtacctcagaagaaagttccttatgcaaaacccatt
cctgctcagttccagcaagcttggatgcaaaataaagttccaattcctgctccaaatgag
gtgctgaatgacagaaaagaagacattaaattggaagagaagaaaaaaacacaagcagaa
attgagcaagaaatggctacattacagtatactaacccacaacttctggagcaacttaaa
attgaaagacttgcacagaaacaggtcgagcaaattcagcctcctccctcatctggcacc
cctctcctcggaccccagccttttcaaggacaaggtccaatgtctcagattcctcaaggt
tttcaacagccccacccatctcagcagatgccaatgaacatggctcaaatggggcctcca
ggtccacagggacagtttaggcctcctggacctcagggacaaatgggaccacaaggtcct
ccactgcatcagggaggtggggggccacaaggattcatgggaccacagggaccccagggc
ccaccccaggggttgccacggcctcaggacatgcatgggccccaaggaatgcagaggcat
cctggacctcatggccctttgggacctcaggggccacctggaccacaaggtagttctggt
cctcaaggtcatatgggtcctcagggtccacctggcccacagggtcacataggcccccaa
ggtccgcctggtccccagggtcacttgggcccacaggggccccctggtactcaaggtatg
cagggaccacctggtcccagaggaatgcagggacctcctcatcctcatgggatccaaggt
gggccagggtctcaagggatccaaggtcctgtgtctcagggacctctgatgggattgaat
ccaagaggaatgcagggccctccaggcccccgggagaaccagggtcctgctccccaaggg
atgatgatgggccacccgcctcaagagatgagaggacctcaccctccaagtggactactg
ggacatggccctcaggaaatgagaggtcctcaagagatccgaggcatgcaggggcctcca
ccccaaggatcaatgctgggacctccccaggaattgcgagggcctccaggctcacaaagt
cagcaggggccaccccagggctctttaggacctccaccccagggtggcatgcaaggaccc
cccggacctcagggacagcagaacccagcaagagggccacatccatctcaagggccaata
ccattccagcaacagaaaacacctctgctaggtgatgggccccgggcccccttcaaccag
gaaggacagagtgcaggtcccccacccctgataccaggcctagggcagcagggagcacaa
ggtcgcattcctcctctgaaccctggacaaggacctggccccaacaaaggtgactcccgc
ggccctccaaaccatcacatgggcccgatgtcagagaggcggcatgagcagagcggcggg
cctgagcatgggcccgagagggggcctttccggggtggccaagactgcaggggtccccct
gataggcgtggccctcacccagacttccccgatgacttcaacagaccagatgacttccac
cctgacaagcgctttggccaccggttacgtgaatttgaggggcgaggaggacctttaccg
caagaagagaagtggaggcgagggggccctgggcctccatttcctcctgatcacagggaa
ttcagcgaaggggatggccggggtgcagcccgaggccctccgggggcatgggaaggccgc
agacctggagacgaacgtttcccccgggatcctgaggacccacgtttccgagggcgcaga
gaagaaagtttcagaagaggagcccccccaagacacgagggtcgtgctccccccagagga
agggatggttttcctggtcctgaagactttggtccagaggagaattttgatgcttctgag
gaagcggcccgaggacgagatctcagaggccgaggtcggggaaccccgcgaggaggaagg
aagggtttacttcccactcctgacgagttccctcgctttgaaggagggcggaagccagat
tcctgggatggaaacagagagccagggccaggtcatgaacattttcgtgatgctccccgc
cctgatcatccacctcacgatggtcattccccagccagcagagaacgctcctcttctctc
caaggcatggacatggcatccctacctccccgaaagcgcccctggcatgatggcccaggc
acgtctgagcacagagagatggaggccccagggggcccttctgaggaccgaggaggcaaa
ggccgagggggcccaggacctgcccagagagtgcccaaatctgggcgttccagctcgtta
gacggagagcaccacgatggataccacagagatgaacctttcgggggccctccaggcagt
ggcaccccttctcgaggcggccggagtggcagtaactggggtagagggagtaacatgaac
tctggcccaccgaggcgaggagcttctcggggtggtggaaggggtcggtag
DBGET
integrated database retrieval system
