Cebus imitator (Panamanian white-faced capuchin): 108317818
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Entry
108317818 CDS
T08783
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi01524
Platinum drug resistance
cimi03430
Mismatch repair
cimi05200
Pathways in cancer
cimi05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108317818 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
108317818 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
108317818 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
108317818 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cimi03400
]
108317818 (MSH6)
DNA repair and recombination proteins [BR:
cimi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
108317818 (MSH6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
HORMA
nSTAND_NTPase5
UPF0524
Motif
Other DBs
NCBI-GeneID:
108317818
NCBI-ProteinID:
XP_017404017
Ensembl:
ENSCCAG00000032532
LinkDB
All DBs
Position
Unknown
AA seq
1269 aa
AA seq
DB search
MSRQSTLYSFFPKSPALSDASKASARASREGGRAAAATRASPPREDAAWSEAGPGPRPLA
RSASPPKAKNLNGGLRRSAATAAPTSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFIR
EKGKSVRVHVQFFDDSPTRGWVSKRLLKPYTGSKSKEAQKGGHFYSAKPEILRAMQRADE
ALNKDKIKRLELAVCDEPSEPEEEEEMEVGTTYVTDKSEEDNEIESEEEVQPKTQGSRRS
SRQIKKRRVISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRK
RMVTGNGSLKRKSSRKEAPSATKRAIGISSETKNTLSAFSAPQNSESQAHVSGGGDDSSR
PTVWYHETLEWLKEEKRRDEHRRRPDHPDFDGSTLYVPEDFLNSCTPGMRKWWQIKSQNF
DLVICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVA
RVEQTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYSVLEGDPSENYSKYLLS
LKEKEEDSFGHTRAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNL
SKETKTILKSSLSSSLQEGLIPGSQFWDASKTLRILLEEGYFREKLSDDIGAMLPQVLKG
MTSESDCIGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDIVSTTR
SGAVFTKAYQRMVLDAVTLNNLEIFLNGTNGSAEGTLLERVDTCHTPFGKRLLKQWLCAP
LCSPYAINDRLDAIEDLMVVPDKISEVVELLKKLPDLERLLSKIHNVGSPLKSQNHPDSR
AIMYEETTYSKKKIIDFLSALEGFKVMCKIIEIMEEVIDGFKSKILKQVISLQTKNPEGR
FPDLTIELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRNR
IGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINA
EERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRPVILL
PEDTPPFLELKGSRHPCITKTFFGDDFIPNDILIGCEEEEENGKAYCVLVTGPNMGGKST
LMRQAGLLVVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILS
HATAHSLVLVDELGRGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAV
RLGHMVCAN
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacagagcaccctgtacagctttttccccaagtctccggcgctgagtgatgcc
agcaaggcctcggccagggcctcacgggaaggcggccgcgccgccgctgccacccgggcc
tctcctccacgagaggatgcggcctggagcgaggctgggcctgggcccaggcccctggcg
cgctccgcgtcaccgcccaaggcgaagaatctcaacggaggtctgcggagatccgcagcg
actgcggcccccaccagttgtgacttctcaccaggagatttggtttgggccaagatggag
ggttacccctggtggccttgtctggtttacaaccacccctttgatggaacattcatccgc
gagaaagggaaatcagttcgtgttcatgtacagttttttgatgacagcccaacaaggggc
tgggttagcaaaaggctcttaaagccatatacaggttcaaaatcaaaggaagcccagaag
ggaggccatttttacagtgcaaagcctgaaatactgagagcaatgcaacgtgcagatgaa
gccttaaataaagacaagattaagagacttgaattggcggtttgtgatgagccctcagag
ccagaagaggaagaggagatggaggtaggcacaacttatgtaacagataagagtgaagaa
gataacgaaattgagagtgaagaggaagtacagcctaagacacaaggatctaggcgaagt
agtcgccaaataaaaaaacgaagagtcatatcagactctgagagtgacatcggtggctct
gatgtggaatttaagccagacactaaagaggaaggaagcagtgatgaaataagcagtgga
gtaggggatagtgagagtgaaggcttgaacagccctgtcaaagttgctcgaaagcggaag
agaatggtgactggaaatggctctcttaaaagaaaaagctctaggaaggaagctccctca
gccaccaaacgagcaattggcatttcatcagaaaccaaaaatactttgagtgctttctct
gcccctcagaattctgaatcccaagcccacgttagtggaggtggtgatgacagtagtcgc
cccactgtttggtatcatgaaactttagaatggcttaaggaggaaaagagaagagatgag
cacaggaggcggcctgatcaccccgattttgatggatccacactctatgtgcctgaggat
tttcttaattcttgtactcctgggatgaggaagtggtggcagattaagtctcagaacttt
gatcttgtcatctgttacaaggtggggaaattttatgaactgtaccacatggatgctctt
attggagtcagtgaactgggactagtattcatgaaaggcaactgggcccattctggtttt
cctgaaattgcatttggccgttattcagattccctggtgcagaagggctataaagtagca
cgagtggagcagactgagactccggaaatgatggaggcacgatgccgaaagatggcacat
atatccaagtatgatagagtggtgaggagggagatctgtaggatcattaccaagggtacg
cagacctacagtgtgctagaaggtgatccttctgagaactacagtaaatatcttcttagc
ctcaaagaaaaagaggaagattcttttggccatactcgtgcatatggtgtatgctttgtt
gatacttcactggggaagtttttcataggtcagttttcagacgatcgccactgttcgaga
tttaggactctagtggcacactatcctccagtacaagtcttatttgagaaaggaaatctc
tcaaaggaaactaaaacaattctaaagagttcattgtcctcttctcttcaggaaggtctg
ataccaggctcccagttctgggatgcatccaaaactttgagaattctccttgaggaagga
tattttagggaaaaactaagtgatgacattggggcgatgttaccccaggtgcttaaaggt
atgacttcagagtctgattgcattgggttgacaccaggagagaaaagtgaactggccctc
tctgctctcggtggttgtgtcttctacctcaaaaaatgccttattgatcaggagctctta
tcaatggctaattttgaagaatatattcccttggattctgacatagtcagcactacgaga
tctggtgctgtcttcaccaaagcatatcaacgaatggtgctagatgcagtgacattaaat
aacttggagatttttctgaatggaacaaatggttctgctgaaggaaccctgctggagagg
gttgatacttgccatactccctttggtaagcggctcctaaagcaatggctttgtgctcca
ctctgtagcccttatgctatcaatgatcgtctcgatgccatagaagacctcatggttgta
cctgacaaaatctccgaagttgtagagcttctaaagaagcttccagatcttgagagacta
ctcagtaaaattcataatgttgggtctcccctgaagagtcagaaccacccagatagcagg
gctataatgtatgaagaaactacatacagcaaaaaaaagattattgattttctttctgct
ctggaaggattcaaagtaatgtgtaaaattatagagatcatggaagaagttattgatggt
tttaagtctaaaatccttaagcaggtcatctctctgcagacaaaaaatcctgaaggccgt
tttcctgatttgactatagagttgaacagatgggatacagcctttgaccatgaaaaggct
cggaagactggacttattactcccaaagcaggctttgactctgattatgaccaagctctt
gctgacataagagaaaatgaacagagcctcctggaatacctagagaaacagcgcaacaga
attggctgtaggaccatagtctattgggggattggtaggaaccgttaccagttggaaatt
cctgagaattttactactcgcaatttgccagaagaatacgaattgaaatctaccaagaag
ggctgtaaacgatactggaccaaaactattgagaagaagttggctaatctcataaatgct
gaagaacggagagatgtatcattgaaggactgcatgcggcgactgttctataactttgat
aaaaattacaaggactggcagtctgctgtagagtgtatagcggtgttggatgtcttactg
tgcctggctaactatagtcgagggggtgatggtccaatgtgtcgcccagtaattctgttg
ccagaagataccccccctttcttagagcttaaaggatcacgccatccttgtattacaaag
actttttttggagatgattttattcctaatgacattctaataggctgtgaagaagaggag
gaaaatggcaaagcctattgtgtgcttgttactggaccaaatatggggggcaagtctacg
ctcatgagacaggctggcttattagttgtaatggcccagatgggttgttacgtccctgct
gaagtgtgcaggctcacaccaattgacagagtgtttactagacttggtgcctcagataga
ataatgtcaggtgaaagtacattttttgttgaattaagtgaaactgccagcatactctcg
catgcgacagcacattctctggtgcttgtggatgaattaggaagaggtacggcaacattt
gatgggacagcaatagcaaatgcagttgttaaagaacttgctgagactataaaatgtcgt
acattgttttcaactcactaccattcattagtagaagattattctcaaaacgttgctgtg
cgcctaggacacatggtatgtgcaaattga
DBGET
integrated database retrieval system
