Cebus imitator (Panamanian white-faced capuchin): 108318638
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Entry
108318638 CDS
T08783
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108318638 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cimi03021
]
108318638 (POLR1B)
Enzymes [BR:
cimi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108318638 (POLR1B)
Transcription machinery [BR:
cimi03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
108318638 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
108318638
NCBI-ProteinID:
XP_017405303
Ensembl:
ENSCCAG00000035252
UniProt:
A0A2K5S2I3
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MDPCSRWRNLPNGPSLKHLTDPSYGIPREQQKAALQELTRAHVESFNYAVHEGLGLAVQA
IPPFEFAFKDQRISFTILDAVISPPTVPKGTICKEASVYPAECRGRRSTYRGKLTADINW
AVNGISKGIIKQSLGYVPIMVKSKLCNLHSLPPQALIQHHEEAEEMGGYFIINGIEKVIR
MLIMPRRNFPIAMIRPKWKTRGPGYTQYGVSMHCVREEHSAVNMNLHYLENGTVMLNFIY
RKELFFLPLGFALKALVSFSDYQIFQELIKGKEDDSFFRNSVSQMLRIVMEEGCSTQKQV
LNYLGECFRVKLSVPDWYPNEQAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFALAKGE
CMEDNPDSLVNQEVLTPGQLFLTFLKEKLEGWLVSIKIAFDKKAQKTNVSMNTDNLMKIF
TMGLDLTKPFEYLLATGNLRSKTGLGLLQESGLCVVADKLNFIRYLSHFRCVHRGSDFAK
MRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQFVYTTSIPALLCNLGVT
PVDGAPHRPYSECYPVLLDGVMVGWVDKELAPGIADSLRHFKVLREKRIPPWMEVVLIPM
TGKPSLYPGLFLFTTPCRLVRPVQNLELGKEELIGTMEQIFMNVAIYEDEVFAGVTTHQE
LFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYQDRSDNKLYRLQTPQSP
LVRPSMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGSVYKSEFID
LSEKIKQGDSSLVFGIKPGDPRVLQKLDDDGLPFIGAKLQYGDPYYSYLNLNTGESFVMY
YKSKENCVVDNIKVCSNDTGSGKFKCVCITMRVPRNPTIGDKFASRHGQKGILSRLWPVE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFIFSEENSALE
YFGEMLKAAGYNFYGTERLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDR
VTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPL
LEKPPPSWSAMRNRKYNCTLCHRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDVV
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggatccctgcagccggtggcgaaacctccccaatgggcctagcctaaaacacttgacc
gacccgtcttatggaatcccgcgggaacagcaaaaggcagcgttgcaggagctgacgcgg
gcgcatgtggagtcctttaactatgctgtgcacgagggtctcggcctcgcggtgcaggct
atacctcccttcgaatttgctttcaaagatcaacgtatctcttttactattctggatgct
gttatcagtccacctacagttccaaaagggaccatctgcaaagaggccagtgtttatcca
gcagaatgccggggccgaaggagtacctatcgtgggaagttgacagccgatatcaactgg
gcagtgaatggaatctcaaaaggaatcattaagcagtctctgggctatgttcccatcatg
gtgaagtccaagctttgcaacttacacagccttcccccacaagccctcattcagcaccat
gaggaggcagaggaaatggggggctattttataatcaatggcattgaaaaggtcatccga
atgttgattatgcctcggagaaattttcccattgcaatgataagaccaaaatggaaaacc
agagggcctggttatactcagtatggagtttcaatgcactgtgtgagagaagaacattct
gctgtcaatatgaacctccactacttggaaaatggcactgttatgttgaactttatttac
cggaaagaactgttttttcttcctttgggatttgcacttaaggcacttgtcagcttttct
gattatcagatctttcaggagctcatcaaaggaaaagaggatgattctttctttagaaac
tctgtttctcagatgttaaggattgtaatggaagagggttgttccacacaaaaacaggtc
cttaactatctaggtgaatgcttcagagtaaagctcagtgttcctgactggtacccaaat
gagcaagctgcggagttcctgtttaaccagtgcatctgtatccacttgaaatccaatact
gaaaagttttatatgctttgtctcatgacacgaaagctctttgctttagccaaaggagag
tgcatggaggacaatcctgatagtttagtgaaccaagaagtccttacaccgggtcagctc
ttccttacgtttctgaaggaaaaactggaaggttggttagtgtctattaaaatagctttt
gataagaaggctcagaagaccaatgtgtccatgaacactgacaatttgatgaagattttt
actatgggactagaccttacaaaaccatttgaataccttcttgctacagggaatctgcgt
tctaaaacaggtcttggcctcctacaagaatctggactttgtgttgtggctgacaagctg
aacttcatacgctatctctcccatttccgctgcgtgcacagagggtctgattttgccaag
atgaggaccaccacggtacgcagactgctgccagagtcttggggcttcctttgtcccgtg
cacaccccagacggggagccctgtggcctgatgaaccacctaactgccgtatgtgaggtt
gtcacacagtttgtgtatacgacatctattccagctttactctgcaacttgggggtcact
cctgttgatggagctccccaccgaccgtacagtgagtgctaccctgtcctgctggacggc
gtcatggttggctgggtggataaggagcttgctccgggcatcgcagattctcttcgtcat
tttaaggtgttgagagagaaaagaattcctccctggatggaagtggtccttatacccatg
acaggaaaaccaagtctgtacccaggattgttcctttttaccactccttgtagactggta
cggcctgtgcagaacttggaattgggcaaagaagaactaattggaactatggaacagatc
ttcatgaatgtcgctatctatgaggatgaagtttttgctggagttaccacacaccaggaa
ctctttccacacagcctgctgagtgtgatcgccaacttcatccctttctctgatcacaac
cagagtccacggaacatgtaccagtgccagatgggtaagcaaactatgggctttccactt
ctcacttaccaagaccgatcagataacaaactgtatcgtcttcagactcctcagagtccc
ttggtgaggccctccatgtatgattattatgacatggataactatccaattgggaccaat
gccattgttgctgtgatttcttacactggctatgatatggaagatgccatgattgtgaat
aaggcctcttgggaacgaggctttgcccatggaagtgtctacaagtctgagttcatagac
ctctctgaaaaaattaaacaaggagatagtagcctggtgtttggaatcaaacctggtgac
ccacgggttttgcagaagttagatgatgatggactgccgtttataggagcaaaactgcag
tatggagatccgtattacagctacctaaacctcaacactggggaaagttttgtgatgtac
tataagagtaaagaaaattgtgttgtggataacatcaaagtgtgcagtaatgacactggg
agtggaaaattcaagtgtgtttgcatcactatgagagtgcctcggaacccaactattgga
gataaatttgccagtcgtcatgggcagaagggcattttgagcagattgtggccagttgag
gacatgccttttactgagagtgggatggtcccagacattctgttcaatccccatggtttt
ccatcccgcatgaccatcgggatgttaattgagagtatggctgggaagtctgcagctttg
catggtctctgccatgatgctacacccttcatattctcagaggagaactcagccttagaa
tactttggtgagatgttaaaagctgctggctacaatttctatggcaccgagaggttatat
agtggcatcagtgggctagaactggaagcagacatcttcataggagtggtttattatcag
cgcttacgtcacatggtctcagacaagtttcaagtaaggacaactggagcccgagacaga
gtcaccaaccagcctattggtggaagaaatgtccagggtggaatccgttttggggagatg
gaacgggatgcgcttttagctcacggtacatcttttctccttcatgaccgcctcttcaac
tgctcggatcggtcagtagcccacgtgtgtgtgaagtgtggcagtttactctctccactg
ttggagaagccacccccttcttggtctgccatgcgcaatagaaaatacaactgtactctg
tgtcatcgcagtgacactatcgatactgtttctgtgccttatgtttttcggtattttgtg
gctgaactggcagctatgaacatcaaagtgaaactggatgttgtttaa
DBGET
integrated database retrieval system
