Ciona intestinalis (yellow sea squirt): 100169670
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Entry
100169670 CDS
T01056
Symbol
thbsb
Name
(RefSeq) thrombospondin Bii precursor
KO
K04659
thrombospondin 2/3/4/5
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04145
Phagosome
cin04512
ECM-receptor interaction
cin04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100169670 (thbsb)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100169670 (thbsb)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100169670 (thbsb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100169670 (thbsb)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cin04147
]
100169670 (thbsb)
00536 Glycosaminoglycan binding proteins [BR:
cin00536
]
100169670 (thbsb)
Membrane trafficking [BR:
cin04131
]
Endocytosis
Phagocytosis
Opsonins
100169670 (thbsb)
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100169670 (thbsb)
Exosomal proteins of colorectal cancer cells
100169670 (thbsb)
Exosomal proteins of bladder cancer cells
100169670 (thbsb)
Glycosaminoglycan binding proteins [BR:
cin00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100169670 (thbsb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
cEGF
Motif
Other DBs
NCBI-GeneID:
100169670
NCBI-ProteinID:
NP_001121588
Ensembl:
ENSCING00000002742
UniProt:
A2SY10
LinkDB
All DBs
Position
6:complement(1710710..1725944)
Genome browser
AA seq
973 aa
AA seq
DB search
MRKLRDLITVSGLLLFSCLSTAQNIADVNLLSSVEQEATQRQLSTKRFQETFTNSEDVFL
IAQFESISQRNSRIFALEQVTPRSHRYRPTSAVELLVNSRTDTVSLKYANNHRGHTLLKF
EGAGISARGRHVLILHFKSTASALRTSRNIKLFVDCSFIREFPRVSGLDEAISSTGPRSQ
IVIGGQHSSDTRTHVIGLRAKFGGTLSDIPETNECRLQTDQFNEFATTIGADNDVATVLA
AQLLQFTRMMTSLKTDMRHMAHETALLRQTIIRCHACGGVDAATDGGSQSIRIPTTPPTD
CDANNPCYQGVQCTQSNSGEVTCGSCPMGMIGDGRDCQDIDECTRANPCSPLTSCVNTEP
GYQCTPCPLGYTGGGAEGVGIDYARSHRQVCTDIDECEIHNGGCGNHSQCVNTAGSFRCG
QCLPGYIGHPSIGCEPMERCGDPARGQIDSCHPYAECLVRRRNPICQCTVGWAGNGFICG
IDSDLDGYPDAALPCTEQTCRKDNCRLTPNSGQEDEDSDRIGNACDDDSDNDGINDIHDN
CPNVPNLDQLNSDSDTMGDACDNCDAVPNFDQSNIDNDQYGDACDVDKDGDGIENRNDNC
PSVPNPNQNDLDNDGLGDICDNCPVHPNPHQTDTDNDRVGEQCDNNLDKDGDGVQDNRDN
CPNVINSSQLDTDNDGIGDDCDDDDDNDGIPDVTPPGPDNCRLVSNFDQRDLNGDGVGDV
CEFDFDADQIEDRFDVCPENAEVHQTDFRMYQTVTLDPLGDAQIDPLWVVQNQGREIIQI
MNSDPGLAIGHTAFKGVDFTGTFYVNTVTDDDYAGFIFAYQDSSSFYTVMWKQSKQTYWQ
STPFRAVAQPGIQLKVVKSETGPGETLRNSLWETGDTPNQVRLLWKDPLDAGWKDRTSYR
WQLIHRPSVGYIRLKMFEGAKLAADSGMILDSTMKGGRLGVFCFSQENVIWSNLQYRCND
TIPNDFFPTGERP
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagctgagagacctaattacggtcagtggtttgctgttgttttcctgtttatcc
accgcacagaacatagcagatgtaaacctcttatcctcggtcgagcaagaagccacacaa
agacaactttctaccaaaagattccaagaaacatttacgaattcggaagatgtgtttttg
attgcacagtttgaatcgatttctcaacgaaactctcgcatttttgctctcgagcaagtg
acgccccgctcacaccgttacagaccaacatccgctgttgaactattggtgaacagcagg
accgacaccgtttcgttaaaatacgccaacaaccatcgcggccacacattactcaagttc
gaaggcgctggaatatccgctagaggtcgccatgtgcttatacttcacttcaagtcaaca
gccagtgcattgaggacgtcacgcaatattaaattattcgttgactgctcctttattagg
gaattcccccgcgtttccggcctcgatgaagccatttcatcaactgggcccagatctcag
atcgttattggtgggcaacattcaagtgacactcgcacacacgttattggacttcgtgca
aagtttggcggcacacttagtgatatacctgagacgaacgaatgtcggctgcaaactgat
caattcaatgaatttgccacaacaataggagccgataatgacgtagccaccgtgttggct
gctcagttgctgcagtttactcgtatgatgacgtcactgaaaactgacatgagacacatg
gcgcacgagaccgccctcttgcggcagacgataattcgatgccacgcctgtggtggagta
gatgctgcaacagacggtggaagccaatcaatccgtattcctacgacgccacctaccgac
tgcgatgcgaacaacccatgctatcagggagtgcaatgcactcagagtaacagcggcgag
gtcacgtgtggatcctgtccaatgggaatgatcggcgacggacgtgactgccaagatatt
gacgagtgcactcgtgccaacccatgttcaccactgacaagttgtgtgaacaccgaaccc
ggataccaatgcacgccatgccctcttggttatacgggtgggggcgcggaaggtgtcgga
atagactacgcaagatctcacaggcaagtttgtacagatatagatgaatgtgaaatccat
aatggtggctgtggaaatcactcgcaatgtgttaatacagcgggttcattccgttgcggg
caatgtctaccaggctacataggccacccttcaataggttgtgaaccaatggaaagatgc
ggagatccagcaagaggacaaatagattcatgtcatccttatgctgagtgtttggttaga
cggagaaacccaatatgtcagtgtacagtcggttgggcgggcaacggattcatttgtgga
attgattctgacttggacggatatccagatgcagccctgccatgcactgaacaaacttgt
cgtaaggataattgtagattgacaccgaacagcgggcaggaagacgaggactctgatagg
attggaaacgcgtgcgatgatgattcggataacgatgggataaacgatatacatgataac
tgtcccaacgtaccaaacttggatcagctcaactctgactccgacacaatgggtgacgca
tgtgataattgtgacgcagttcctaattttgaccaatcaaatatcgacaacgatcaatat
ggtgatgcatgtgacgtagacaaagatggcgacggcattgaaaaccgaaacgacaactgc
cctagcgttcctaaccctaatcaaaacgacctcgacaacgatggtcttggagacatatgc
gataactgccctgttcatccgaatccacaccagactgatactgataatgacagagtcggc
gaacaatgcgataataatttggataaagacggtgacggagtccaagacaaccgagataat
tgcccgaacgtaatcaacagttctcaattggacacggataatgacggaataggtgatgat
tgtgacgacgatgacgacaacgatggtatacctgacgtcaccccacctggtccagacaac
tgtcgtctcgtttccaactttgaccaacgtgatttaaacggagacggagtcggtgacgta
tgcgagttcgacttcgacgcagatcagatcgaagacagattcgacgtatgtccggaaaac
gcggaggttcaccaaaccgatttccgaatgtaccagaccgtcacgcttgatccgcttggg
gatgcacagattgatcctttatgggttgtgcagaatcaggggcgtgaaatcatacagata
atgaacagtgatcctgggttggccattggccacaccgcgtttaaaggcgtggatttcacc
ggcacgttttacgtgaacacagttactgacgatgattatgcaggttttatattcgcttat
caggacagcagtagtttctacactgttatgtggaagcaatcaaagcaaacttactggcag
tcgactccgtttcgcgcagttgctcaacctggtatccaactaaaggtggttaagtcagag
actgggccaggtgagacgcttcgtaactctctatgggaaactggggatacaccaaaccaa
gttcgactactatggaaagatcctttagacgctgggtggaaagacagaacatcttatagg
tggcagttaatacatcggccatcagttggatacataaggcttaagatgtttgaaggagca
aaattggctgctgattctggcatgatattggactctactatgaaaggcggtcggttggga
gtgttctgtttttcgcaagagaacgtaatatggtcaaatctacagtacagatgtaacgat
acgattccaaacgactttttcccgactggtgaaaggccatga
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integrated database retrieval system
