Ciona intestinalis (yellow sea squirt): 100169988
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Entry
100169988 CDS
T01056
Symbol
zf(rbz)-3
Name
(RefSeq) Zn-finger (Ran-binding)-3
KO
K11862
ubiquitin thioesterase ZRANB1 [EC:
3.4.19.12
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cin01002
]
100169988 (zf(rbz)-3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100169988 (zf(rbz)-3)
Enzymes [BR:
cin01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100169988 (zf(rbz)-3)
Peptidases and inhibitors [BR:
cin01002
]
Cysteine peptidases
Family C64
100169988 (zf(rbz)-3)
Ubiquitin system [BR:
cin04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
100169988 (zf(rbz)-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AnkUBD
OTU
Zn_ribbon_RanBP
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
100169988
NCBI-ProteinID:
NP_001123331
Ensembl:
ENSCING00000013158
UniProt:
Q1RL65
LinkDB
All DBs
Position
8:complement(5009990..5020010)
Genome browser
AA seq
688 aa
AA seq
DB search
MSKTEKRWSCPSCTYDNYSASSKCSVCLFPRVPEVIRPPPPNQDAGLLIESFSDFSDTKD
NEHQLIICPSDALRKPGKHKSNSTEDVKKEETGSSSELAKFVEEESSKKRNDINVNTDLA
EQPWFCGACTFINSPQHTLCSKCRTSKDSTSPSGASAKGATASNSEAATEDNNTKNRKWT
CAVCTYINWCSSKMCVMCQNPQPLSNARIVRGTACGGNLSRSMSSSHLPSSRLEILDNRS
MKTRSRNQNWLFLKACIGVVEENAEAVDAYLANGGNIARTLTLDEVNLLNRPSAFDVGHT
LVHLAIRFQRHGILALLLNPEIAPRGFKRNPAHLSPQIADLIRREIMASLRTRKGDFHCR
FLSEFTTFQLPIEICDLPPTIQKLLFNELLDQNVQKELEEECAINWSPSLMHTGDCNSRL
YALWNRSAGDCLLDSVLQATWGVFDRDNVLRSAMSESLQDCATSFFRRWREWEQYQAQLL
GFTFTERQCLQDWAFINSLAQQPGAALEHCHIFVLAHILRRPIIVYGIKYLKSYRGDTLG
FAKFQGVYLPFLWDQVFCYTSPIALGYTRGHFTALVTMENDSKDICAGAQHRNQTYNTIK
HLPLVDSDGKVLPIHFTLRGQGVSEDQRKEILKEWLDCHVTDEGWLVARQRLGKRPPSVT
RLLDEWLDHYRHMSFRRLGEEGHSDAED
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaacagaaaaacgatggtcttgcccttcatgtacgtacgataattactcagct
tcttctaagtgttctgtttgtttgtttccaagagtcccagaggttatccgtccccctcct
ccaaatcaagatgcaggtttactcattgagagcttttctgacttctctgacacaaaagat
aacgaacatcagttaattatttgtccttctgatgctttacgaaaacctgggaaacataaa
agcaactcaacagaggatgttaaaaaggaagaaactggaagttcttcggaattagcaaaa
tttgtagaggaagaatcatccaagaagagaaatgacataaatgtcaatacagatctggca
gaacaaccatggttctgtggagcttgcacattcataaactctcctcagcatacattgtgt
tctaaatgccgaacatctaaagatagcacttcccctagtggtgctagtgcaaagggagcc
actgcttccaattctgaggcagctacagaagacaacaatactaaaaaccgcaaatggact
tgcgcagtctgcacatatataaactggtgctcttcgaaaatgtgcgttatgtgtcagaat
cctcaacctttgagcaatgccagaattgtgcgtggcactgcttgtggtggtaacttatca
cgcagtatgtcatcaagccacttgccttcatcacgacttgaaattcttgacaaccgttca
atgaaaacaagatcgcgcaaccaaaactggctgtttctaaaggcatgcatcggagtggtt
gaagaaaatgcagaagcagtcgatgcttacttagcaaatggtggaaatattgctcgtaca
ttgactttagatgaagtcaatttactcaaccgaccttctgcgtttgatgtcggtcacaca
ctagtacaccttgccattaggtttcaaagacacgggattctagctctccttcttaaccca
gagattgcaccaagggggtttaaacgcaatccagcccatcttagcccacaaatcgctgat
cttattcgacgtgagattatggcaagcctacgaactcggaaaggagattttcattgcaga
tttctctcagaattcaccacttttcagctccctatagaaatatgtgatttacctccaact
atacaaaaacttctgtttaatgaactgctggatcaaaatgttcagaaagaactggaagag
gaatgtgctattaactggtccccttccctcatgcacactggcgactgcaacagccggctc
tatgcactctggaatcgctcggcaggcgactgtttgcttgactctgtgctacaagcaaca
tggggggtgttcgaccgcgacaatgtcttacgttctgcaatgtctgagagtttgcaggat
tgcgcaacaagtttttttcgtcgttggcgggaatgggagcaatatcaagcacaactactc
gggttcactttcacagagcgacagtgcctacaggactgggcttttatcaactcactcgca
cagcagcctggtgctgcattagaacattgtcatatctttgtacttgctcatattctaaga
cgtcccataatcgtgtatggaattaaatacctgaagagctacagaggggacacactgggt
ttcgcaaaatttcaaggtgtttatcttccctttttatgggatcaggtgttctgttacaca
agcccaatagcacttggatacacacgtggccattttacagctcttgttacaatggaaaat
gatagcaaggacatttgtgctggagcccaacatagaaatcaaacatacaacacaatcaag
cacctcccactggtagatagtgatgggaaggttttgccgatccacttcactctgaggggg
cagggtgtaagtgaagatcaaaggaaagaaatcttaaaagaatggcttgattgtcatgtg
acagatgagggttggttggttgctaggcaacgactcggaaagcgacctccatcggtgacg
agattgttggatgaatggcttgaccattaccgacacatgtcttttcgaagattgggagaa
gaagggcattcggatgcggaagattag
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