Ciona intestinalis (yellow sea squirt): 100169990
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Entry
100169990 CDS
T01056
Symbol
zf(c3h/ring)-1
Name
(RefSeq) zinc finger protein ZF(C3H/RING)-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100169990 (zf(c3h/ring)-1)
Enzymes [BR:
cin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100169990 (zf(c3h/ring)-1)
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100169990 (zf(c3h/ring)-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH
zf-CCCH_2
Torus
zf-CCCH_DUS3L
zf-C3HC4
zf-CCCH_3
zf-RING_UBOX
zf-RING_2
zf-CCCH_PARP12
zf-RING_5
zf-CCCH_RBM22
zf-C3HC4_4
zf-rbx1
YGR210-like_G4
IBR_1
Motif
Other DBs
NCBI-GeneID:
100169990
NCBI-ProteinID:
NP_001123332
Ensembl:
ENSCING00000007190
UniProt:
Q1RLH2
LinkDB
All DBs
Position
7:3613248..3621235
Genome browser
AA seq
447 aa
AA seq
DB search
MLLLYIGSLIVCSVKFGSKHHRRNQDNKPKMASSGQNTPCHNSQPWTKKVLCRYFLHGAC
KFGSECSYSHDTKAQANMVCRYYQSGHCSYGDRCRYDHIKPDKGRKTIKAKYPTDSIISD
STKYENSLTGADWANAVEFVPGKEYSPRASNTYSSALKEGLESSTSTDKYNDLCPFALNG
ECGNGENCAYVHGLLCDMCCLYILHPSDVLQQEKHKEECIKYHEEDMLESFKVAESREIA
CGICMEVVWEKADEKDRKFGILENCNHTFCLDCIRKWRSAKAFNNTVVRACPQCRVSSSF
VTPSERWIEDKEEKKKLIQGYKDHLSNKACKYFDQGRGKCPFGANCFYLHAYSDGRKQDR
SKIQTRNVVDSNGRAGHLDLNTIWDMLGDEDSHAEDHARLMNLLDDDADLFDLFYLLGDD
TMSSGDEYSFEYPYHYNGGEDFFTDSD
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgcttctgctgtatataggtagtttgatagtttgctctgtcaagtttggttcaaaacac
cacagaagaaatcaagataataaaccaaagatggcctcgtcaggacaaaacacaccttgt
cacaacagtcagccttggacaaaaaaagttttatgcagatacttcctacatggagcttgt
aaatttggttctgaatgctcgtattcacatgacactaaagctcaagccaatatggtgtgt
cgttattatcaatctggacattgttcatacggtgaccgttgcagatacgatcatataaaa
ccagacaaggggcggaaaactattaaagcaaagtatcctactgacagcatcattagcgac
tcaacaaaatatgagaactcattgactggtgctgattgggcaaacgctgtcgagtttgtt
ccaggaaaagaatattcaccgagagcttcaaacacatacagctctgctttaaaagaagga
cttgagtcatcaacctcaacagataaatataacgatttgtgcccattcgctctcaacggt
gaatgtgggaacggcgaaaattgtgcatatgttcatggcttgttgtgtgatatgtgttgt
ctgtacattctgcatccaagtgatgttttacagcaggaaaagcacaaagaggaatgcatt
aaataccatgaagaggacatgcttgaatcgtttaaagttgctgaaagcagggaaattgcg
tgtggaatatgcatggaagtggtttgggaaaaagcagatgaaaaagaccgaaagtttggg
attttggaaaactgtaatcatactttttgtttggattgcattagaaagtggagaagtgcc
aaagcgtttaacaatactgttgtaagagcatgtccacaatgtcgagtgtcgtcatcattc
gtcaccccaagtgaacgctggattgaagataaggaagaaaaaaagaagctaattcaagga
tataaagatcatctcagcaacaaagcgtgcaagtatttcgaccagggtcgcggaaaatgt
ccgtttggtgcaaattgtttctatttgcacgcatacagtgacggtagaaagcaagaccga
agtaaaatacaaacaagaaatgttgtggatagcaatggtagagcagggcaccttgatttg
aacactatatgggacatgcttggtgatgaagacagccacgcggaggatcacgctcgcctc
atgaacctcctggatgacgatgccgatcttttcgatctcttttatcttctcggtgacgat
acaatgtcatcaggagacgaatactcgttcgaatatccttaccactacaatgggggggag
gattttttcactgattctgactga
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