Ciona intestinalis (yellow sea squirt): 100170014
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Entry
100170014 CDS
T01056
Symbol
pias-like
Name
(RefSeq) zinc finger protein
KO
K22403
zinc finger MIZ domain-containing protein
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
100170014 (pias-like)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zmiz1_N
zf-MIZ
zf-Nse
zf-Sec23_Sec24
ApbE
Motif
Other DBs
NCBI-GeneID:
100170014
NCBI-ProteinID:
NP_001123220
Ensembl:
ENSCING00000005821
UniProt:
Q1RL77
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Position
14:complement(1981825..2001357)
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AA seq
1142 aa
AA seq
DB search
MPMNTAMHTTNLTNQDHHTRQTLDRLECIQKHLKNPDSFSRTARELLEWCSDARAFQRQF
HQSLLGCLTVVSEVAGKPGFEPELCYKLLALCNDHRDKFSPNAASMLSKWLHEVNKRTIL
QPHMEPMKVNNSMSPGSVPLASPITGMMTQKLGFPQPHMGQRPHEPPQNWNSPQPPMQPN
HHPSLSVITTVWGVSTTQTPPVPVRSQSNATSFAQQHMGHPDPMQTNYNYQHDKPGMGNM
YHSTSSMYANGHRGMGPGRYGNNGSPGHHIQDQSHHPPAAAAAAAAIAAAAAAATATATA
TATFIKEHQEQPSGYDPVSRLPPPYYTKRYLICTICFLQNTGGMMDHHMHPNMNHPSNTH
PMMQQPNRFRPQMPHQYNRGPGSYQMGTGMGPMQNQRHPSVRNYNNEHNFKTSCGPQQNY
GQVPFNGSPNMPNHYNKPPEPIHGTHQHPGGSVGPRYSPRLPNNHPNSQQKPYFQGQHGD
PNGSYPQRHGYPYPADPNPIPGNPTPPLTPGSAHNVPPYPNTEPAIPAAISEGKSTHDEL
RLTFPVRDGIVLGPFRLGHNLVVSSHAFHLRPNVYRTLFERHDLDLQFKCYHHEDMLKHT
NWPHSVQVSANHVPLTIPRGQDRSSHKPLYLKKVCQPGRNTVDITVSACCCSHFFVLQLV
HRPSIRFALKGLMLKRVLPGYHCIEQIKRNFANGAISNSSGTGMNCDTGGEMPPIKVSLR
CPITYTRIKIPARGKDCKHIQCFDLESYLQMNSDNATWRCPICHKNALLEYLEVDQYIQN
ILKAVQDRECHLVSIDANCKWTPLPVSTPHDGAMRGGPDPAMNGMVKTENFDRISVKQEP
NSMSGPFNTKTEPQFISALSIKQEPHHHRNEVHVKQEPDGPPNKRLKSVTSPGLTLSNLP
APSPGSYSSQPCHRFNSNDSNQGYSQGYDFNRCGVASNPAPCPGFMRGGPAVPMGNEISD
NIARNDMVPIEKRLNHAALSTGNNGSPNRRAPGNPKTPQDPNTPIRPPSSSSLTPQSNNC
PTPSSGAFSAAPTCGSINPLQTPNLSSNQQDMNTCKNEPVETCLNPFPSLFDDDGVTSVP
SISFDGETVDFKTDAITDETIGSLDILPDNSDLDQILSMPDDLVGTDNTDEQDILHLFDK
TS
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgcctatgaacactgcaatgcacacgaccaacttaacaaaccaagaccatcacacgcgc
cagacgctagaccgattggaatgtatacagaagcatttgaagaacccagactcgttctca
cgtactgcgagagagttgttggagtggtgctcggacgccagagcctttcaacgtcagttc
caccagagtttgctcggctgtctgacggtcgttagcgaagtggcgggcaagcctggtttt
gagccggaactctgttataaactacttgcgctctgcaatgatcatcgcgacaaattttca
cccaacgcagcttctatgttaagcaaatggttacacgaagtgaacaagcgaaccatactt
cagccgcacatggaacccatgaaagttaacaacagcatgtcccctggctctgtacccctt
gcctccccaattacaggcatgatgacccaaaaacttggattcccgcaacctcacatgggt
caaaggccgcacgagccaccgcagaactggaactcaccccaacccccaatgcaaccgaat
catcacccttctttgtctgtcataaccacggtgtggggggtgtctacaacccagacgcca
cctgtcccagtaaggagtcaatccaatgccacatccttcgcccagcagcacatggggcat
ccagacccgatgcagacaaactataactaccagcatgataaacctggcatgggtaacatg
taccacagcacgtcatccatgtacgcgaatggccatcgtggcatgggtcctggaagatat
ggcaacaacgggtcacctggtcaccacatccaagaccagagccatcatcctccagctgcc
gccgccgccgctgccgccatcgctgctgctgccgccgccgctacagcgaccgctacagct
acagccacgttcattaaagagcatcaagaacaacccagcggctacgacccggtgtcccgt
cttcctccaccctactatacaaaacggtatctgatttgtacaatttgttttctacagaat
acaggcggtatgatggatcaccatatgcatcctaatatgaatcacccatccaacacacac
cctatgatgcaacagcccaacagatttcgaccccaaatgccacatcagtacaacaggggt
ccagggtcttatcaaatgggcacgggaatgggcccaatgcagaaccaacgccaccccagt
gttcgtaactacaacaacgaacacaattttaaaacatcctgtggacctcaacagaattat
ggccaagttccgttcaacggaagccccaacatgccgaatcattacaacaagccccctgaa
cccattcacgggacacaccagcaccctggtgggtcagtgggcccccggtacagtccccgg
ttacccaacaaccaccccaacagccaacagaaaccttacttccaaggccagcatggtgac
cctaatggttcgtacccacaacgtcacggctacccgtacccagctgatccaaacccaatt
ccagggaaccctacgccccctttaaccccaggcagcgcccataacgtgccaccatatcca
aacacagagcccgctatcccagcagcaatttctgaaggaaaatcaacacacgatgaactt
cgtctgaccttccccgttcgagacggcatcgtcctcggtccttttcgccttgggcacaat
ctagtggtaagcagccatgcgtttcatctgcgacctaacgtataccggactctcttcgaa
aggcatgacctggacctacagtttaagtgctaccaccacgaagacatgcttaaacacacg
aactggccgcattcagtacaggtgagcgctaatcatgttccgctcacaataccacgcggc
caggaccgttcaagccataagcccttgtacctgaagaaggtttgccaacctggaaggaat
acagtggacatcacagtgtcagcatgttgctgttcgcatttcttcgtactgcaactggtt
caccgtccaagtatcagattcgcgttgaaaggccttatgctcaagcgagttcttccgggt
taccactgtatagaacaaatcaagcgaaacttcgcgaacggggctattagcaactcaagc
ggaacggggatgaactgcgacacaggaggggaaatgccaccaataaaagtatcattgcgc
tgcccaatcacgtacacaagaattaagattcccgcacgaggcaaagactgtaagcacatc
cagtgcttcgatcttgaatcataccttcaaatgaacagcgataacgctacttggagatgc
ccgatatgccacaaaaacgcactgcttgagtatttggaggtggatcagtacattcaaaat
attctcaaagctgtccaggaccgtgagtgccatcttgtttccatcgatgccaactgtaaa
tggacaccactgccggtcagtacaccgcatgatggcgccatgcgcggagggccagaccct
gccatgaacgggatggtaaaaacggaaaactttgaccgaataagcgtgaaacaggaaccc
aattcgatgtcgggaccttttaatacgaagacagagcctcaattcataagcgctttgagc
attaagcaagagccgcaccatcacaggaacgaagtgcatgtgaagcaagaacccgacggt
ccaccaaataaacgtttaaaaagcgtcacatcaccaggtttaacactaagtaacctacca
gctccaagtcctggaagttattcatcccagccttgccacaggttcaactcgaacgattct
aaccaaggttattcccaagggtacgacttcaaccgttgcggtgtggcttcgaacccagcc
ccatgccctgggttcatgcgtggagggccagccgttcccatgggcaacgaaatatccgac
aacattgccagaaacgatatggttcctattgaaaagcgattaaaccacgcagcactttct
acgggcaataacggttctccaaaccgtcgagcaccaggaaatccaaagactccacaagac
ccaaacacccccattcgccccccaagtagcagctccttaaccccacaatccaacaactgc
cctaccccttcctctggtgcattctccgctgcgccaacgtgcggatccattaatccactc
caaaccccaaacttaagcagcaaccaacaggatatgaacacctgcaagaacgaaccggtt
gaaacctgtctaaacccgttcccgtccctattcgacgacgatggagtgacgtcggtgcct
agcataagttttgatggggaaacggtggatttcaaaactgatgcaataacagatgaaaca
atcggctctctagatattctgcccgacaactctgatctcgaccaaatcctaagcatgccc
gacgatctggtaggaacagacaacacagacgagcaagatattctgcatctattcgacaaa
acctcgtga
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integrated database retrieval system