Ciona intestinalis (yellow sea squirt): 100170017
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Entry
100170017 CDS
T01056
Symbol
zf(an1)-3
Name
(RefSeq) AN1-type zinc finger protein 4 isoform X1
KO
K12163
AN1-type zinc finger protein 4
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100170017 (zf(an1)-3)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cin04990
]
100170017 (zf(an1)-3)
Ubiquitin system [BR:
cin04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
100170017 (zf(an1)-3)
Domain-containing proteins not elsewhere classified [BR:
cin04990
]
Zinc finger domain-containing proteins
AN1-type zinc finger domain-containing proteins
100170017 (zf(an1)-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
zf-AN1
Rad60-SLD
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
100170017
NCBI-ProteinID:
XP_009862452
LinkDB
All DBs
Position
1:complement(7387817..7402015)
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AA seq
741 aa
AA seq
DB search
MNDKEFFDEGGNIHSSYRLSYNVMELFIETLTGTCFELRVSPYETVIAVKAKIQRLEGIP
VSQQFLIWKNVELEDECCLRDYNITDGCTLKLVLAMRGGPINTRRVISMEESRDLPDPLD
NPEDLFDKPTTPHSGGNGTKQVTLLVYRDGDQLNFFRVVDRGDGTLTPFSESLSGSACNL
HEEEEEEIALPSSKPPALSVAQMVENNITASKMKQLRTNMENLMIAPQPNKVTSVMKPKP
PSMPRKLDGTTMKRYSQQPKPLKFKPPTPAAHAEPQNKNRTSEMMRSLSNEDAPATVSEP
RHSRLRCFRNVTDTNNDLVTSEKKVSEDIKETNQATANTQDATEGSGRFSPRTRRLLNAL
ESDSYQRRSYLMPRPRQLSGMTYNRHDMYLRSYGLLPSPDQLPPMPTNHEPSSPRNQEEV
DMATKVFETNQGVKYSTLDGYPIPPYWAGGGNGVLKSPIWEQGQPVADGCKSGKTVAGKL
GTTQRSSAEGGAFGFTIPESPIRKLEDQGARSKLSKSALRSRRFTPEPPKTMEQKPSRHR
KLVRGQNVSGLPPTTRSDEPTTPLRQSYKKNNIIKESHARVETMSKQEAREVVDFINKAV
DANVLRNLVRSPTKDNQRGSSGQSGHRLPSSNIHYTDKRQPMKSPHGSAYMRLAPSCTSP
TAVRPPSILPPVKHTSKKKRCFLCGKRTGLATSYTCRCGNNFCASHRYAEAHDCTYDYKT
AGRKILKEANPLVSAPKLPKI
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaatgataaagaatttttcgacgaagggggaaatattcacagtagttacagactttcg
tacaatgtgatggaattattcattgaaacattgacggggacttgcttcgaattgcgagtc
tcaccatacgaaacagtcatcgctgtaaaagctaaaattcaacgcctggaaggaattcct
gtctcccaacagtttctcatttggaaaaacgtagaattagaagatgaatgttgcttaaga
gattacaacattactgatggttgcactttaaagttggttcttgcgatgagaggcggtcca
attaacacacggagagtcatctcaatggaagagtcacgtgaccttcccgaccctctggat
aaccccgaggatttattcgataaaccaacgacaccacatagtggtggaaatggcacaaaa
caggtgacacttcttgtctaccgagatggtgatcagctgaatttcttccgcgtggtggat
cgtggtgatgggactttaactccattctctgaatctctaagcggatcagcctgcaacctc
catgaagaggaagaagaggagatcgctcttccctcatctaaacctccagctttaagtgtg
gcgcagatggtggagaacaacatcaccgcttccaagatgaaacaacttcgaacaaacatg
gaaaacctcatgatcgctccacaaccaaataaggtaacatcagtgatgaaaccaaaacca
ccttcaatgccaagaaaacttgatggaacaacaatgaaaagatattctcagcagccaaaa
ccccttaaattcaaacccccaaccccagccgctcatgcggaaccacaaaacaaaaaccga
acatcagaaatgatgaggtcactcagtaatgaagatgcaccagccaccgttagcgaacca
cgtcattctagattacgttgctttcgtaacgtaacagacacaaataatgatttggtaact
tctgagaaaaaagtttctgaagatataaaagaaacaaaccaagcaactgctaatacacag
gatgcaactgagggcagtggccgttttagtccaaggacgcgtcggttgttgaatgctttg
gaatccgattcttatcaacggcgttcctacttaatgccaagaccccgccagttatcaggc
atgacgtacaacagacacgacatgtacttgcgttcatatggacttctaccctcaccagat
caattacctccaatgcccaccaaccatgaaccctcgtctccaaggaatcaagaggaagtt
gacatggctacaaaagtttttgagactaaccaaggtgtgaagtatagcacccttgatggt
taccctatccccccgtactgggcagggggcggcaacggggtcctaaaaagccccatttgg
gagcagggccagcctgttgcagatggttgcaagagtggaaaaactgttgcgggaaaatta
ggaacgactcaaagatcttccgcggagggtggtgcgtttggtttcaccattcctgagagt
ccgatccggaagttggaagatcaaggagcaaggtccaagttatcaaaatctgctcttcgg
agtcgtagatttactcctgaacctccgaagacgatggaacagaaaccaagccgacatcga
aagttggtgagaggacaaaacgtgtctggtttaccaccaaccacacgtagtgatgaacct
acgactcctttaaggcaatcctataagaaaaataacatcattaaggagtctcatgcgcgt
gtcgagacgatgtctaagcaagaagcacgagaagtggttgatttcatcaacaaagcagtt
gatgccaacgtgcttcggaatcttgtaagaagtccaactaaggacaaccagagaggcagc
agcggacagagtggccataggttacccagttccaatatacattacacagacaaacgtcaa
cctatgaagtctccacatggtagtgcttacatgagacttgccccttcatgcacttccccc
actgctgtgcgaccaccatcaatattaccccctgtaaaacatactagcaagaagaaaagg
tgctttttgtgtggaaagcgtactggtttagcaaccagttatacgtgcagatgtgggaac
aatttctgtgccagtcacagatatgcagaagcacatgattgcacatatgattataaaact
gctggtcgtaaaatccttaaagaagccaaccccttggtcagcgcgccaaagttacccaaa
atctaa
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