Ciona intestinalis (yellow sea squirt): 100170019
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Entry
100170019 CDS
T01056
Symbol
zf(bed)-4
Name
(RefSeq) zinc finger BED domain-containing protein 4
KO
K24640
zinc finger BED domain-containing protein 4
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
100170019 (zf(bed)-4)
Transcription factors [BR:
cin03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
100170019 (zf(bed)-4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
100170019
NCBI-ProteinID:
XP_018671780
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MSAIAKVSSSKVWDYFNVSEGSVKCQLCKNLVSQGSTSSAQKNTSNLWSHLRSKHREVEV
YEQAHCHKIGKSSKVVQPTLFQSFDNSRKWSNTDGRSRNLDKLIIEMIATDIQPFSVTND
IGFKRLLATAEPRYNLKDEKYYRTEMLPKVHLKVVDKIKNMLKEENAGESLSFTTDCWSG
STESLMSLTAHFIDNQWKRKQLVLSVKSMSESHTGDYIGKVFLDILSQWEIDRSRVLLVL
RDSGANVVKGMRVADVSDFSCCAHTMQLIIKEGIESQRVVIDIVAKLKRCATHFNHSTLA
KKRLHAIQNQVGLPVHSIIQAIPTRWNSTLHMLRRMLEQKHALSIYASEYGHFSLPNTYE
WELVAKLVALLIPFETITLEISHSEASASCILPSIAVLKALLQSDNEATFGIGTIKGTMC
ESLLRRYCNVENVKPVVIACLLDPRFKDKPFSSEIVLGRAKDWLINEVKEQDQGEEPVAA
KKQKQSSDSENDLLSNLYKNVLGQGSTDNNECESTDVQTEINKYLSEPLIDRSTGHPLDW
WKNNETRFVILAKLARKYLNPPPSSVPSERDFSTIGNIYEDKRSRLTGEHAEQLCFLYYN
LHLLEYNY
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccattgcgaaagtttcctctagcaaagtttgggattattttaatgtttcggaa
ggttcagttaagtgccaactgtgtaagaacttggtcagtcaaggttccacttcttctgct
cagaaaaatacaagtaacctatggtcacatttgcgtagtaagcacagagaagtagaagtg
tatgaacaagcgcactgccataaaataggcaaaagttcaaaggtcgtgcagcctacactg
tttcagtcgtttgacaatagtagaaagtggtctaatacagatggtcggtccagaaatttg
gataagctgataattgagatgatagctacagatatacagccattttcagtcacaaatgac
ataggattcaaacgtcttctggcgactgcagagccaaggtacaatcttaaagatgaaaag
tattacagaacagaaatgttgcctaaagttcacctgaaagttgttgataaaattaaaaat
atgctcaaagaagaaaatgcaggagagagtttgtcatttactacagattgttggtcaggt
tcaactgaatctcttatgagtttaacagctcattttattgacaatcaatggaagagaaag
caactagttttgtcagtaaagtcaatgtcggagtctcacacaggagattacataggtaaa
gtgttcttggacattcttagccagtgggaaattgacagaagtcgtgtgttgcttgtttta
cgtgacagtggtgctaatgttgtcaaaggcatgagggtagcagatgtttcagatttcagc
tgctgtgcacataccatgcaattaataataaaagagggtatagaatctcaaagagtcgta
attgatattgtggcaaagcttaaacgctgtgccacacacttcaatcattcaacacttgca
aagaaacggctacatgcaattcaaaaccaagttggtttgccggttcattcaattatacag
gcaatcccaacaagatggaattcaactctacatatgttgcgtaggatgttggaacagaag
catgctctcagcatatatgcaagtgagtatggtcattttagtttaccaaatacatatgag
tgggaacttgtcgccaaattagttgctttattgataccctttgagacgataacgttggag
attagtcattctgaagcttccgcatcatgcatactacccagtattgcagtacttaaagct
cttctacaaagtgataatgaagcaacatttgggattggtactataaaaggaaccatgtgt
gaaagcctgttaagaagatattgtaatgttgaaaatgttaaaccagtggtgattgcttgc
ctcctggatccccgattcaaagacaaaccattttcatcagagattgtcttaggtagagct
aaggattggttaattaatgaagttaaggaacaagaccaaggagaagaaccagtggcagca
aagaagcaaaaacaatccagtgatagtgagaatgacctattgtccaatttgtacaaaaat
gtcttaggtcaaggatctactgataacaatgagtgtgaatcaacagatgttcaaacagaa
attaataaatatctttcagaaccacttattgatcggtctaccggacatccactggattgg
tggaaaaataatgaaactcgttttgtcattctagccaaactagctagaaaatatttaaat
ccaccgccttcttctgtgccaagtgaacgagattttagcacaattggaaatatatatgaa
gataaaagaagccgcctcactggcgaacacgcagaacaactttgtttcctgtactataac
ttgcatttgctcgaatacaattattaa
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