Ciona intestinalis (yellow sea squirt): 100170044
Help
Entry
100170044 CDS
T01056
Symbol
zf(ubp/ring)-1
Name
(RefSeq) BRCA1-associated protein
KO
K10632
BRCA1-associated protein [EC:
2.3.2.27
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100170044 (zf(ubp/ring)-1)
Enzymes [BR:
cin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100170044 (zf(ubp/ring)-1)
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100170044 (zf(ubp/ring)-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRAP2
zf-UBP
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
DUF2779
Motif
Other DBs
NCBI-GeneID:
100170044
NCBI-ProteinID:
XP_002130211
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
MKISLVHIRLSIAAGHSLPDVSFKAACINSDGSLKEDFLSVEDEHVETSLNNVSPMKPCK
WSTKIADKITFDGLDENDRHELLIKLKGQRYYRQLTITTHDNTELTMSQNETGASCSSEG
NIKSVVGVDGVVGGKVNEDTKHTKVASKKKKQKPNKQTNDEQRMNENEAEASSNQKARHS
SENIFPFHSGNPAVDVTNGVVHLYKSNYKVVAEEPFTHPDTNTLCMLAVPASIDAHGILE
FTAPFINVIRRIRIIRDRTPSQYMVLLLFCTSQDACNFYFNFNNQHFSSLIPEEICHLAF
VASVEATSVYDETNGGFIPLSNSTELPDCMVCLERMDESVQGVLTILCNHSFHASCLRQW
EDQCCPVCRYVQTPHAQSNNKCMVCGSVEDLWICLVCGNVGCGRYTSEHAQQHYIETQHN
YAMALSDNRVWDYAGDYFVHRLFQNKEDGKLVEKGGEHEDKVEGMQLECMYLLTSQLESQ
RKYWEDEVNKAEIQGVKKYEEINKQLETTMMECKGLGKKVEDLEKEKQSLKHRNQQLSNK
FTETLADLSNERELNKSLVHNQDVWKSKVIALEEQSLKQKKEIDDLREELRDVMFYIQAS
QTIEKEGGGMREDIRGGQILVGPGTSSGGDQKKRGKKKR
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttctctggtccacattcggcttagcatcgctgcaggtcactcactacctgac
gtttcttttaaagctgcttgtataaacagtgacggttcgttaaaggaagattttttatcg
gtagaagatgaacatgttgaaacatcattgaacaatgtttctcctatgaaaccatgtaaa
tggagcacgaagattgcagataaaataacgtttgatggacttgatgagaacgacagacat
gagttgttgattaaattgaaaggacaacgatattatcgacaattaacgatcacaacacat
gataacacagaattgacgatgtcgcaaaacgaaactggagcaagttgttcaagtgaagga
aacataaaatctgttgttggtgttgatggtgttgttgggggaaaagtaaatgaagataca
aagcataccaaagttgcatcaaagaaaaaaaagcaaaaaccaaacaaacaaacaaatgat
gagcaacgtatgaatgagaatgaggctgaagcatcgtccaatcagaaagctcgacattct
tcggaaaatattttccctttccacagtggaaatccggcagttgatgttacaaatggggtc
gtgcatctttataaatcaaattacaaagttgtagcagaagaaccttttacacaccctgac
acaaacactttgtgtatgctggctgtgcctgcttctatagatgctcatggtatactggag
ttcacggctccgtttattaacgttatacgaagaataagaattattcgcgaccgaactcca
agtcaatacatggtgttgttgctgttttgtacaagtcaagacgcttgcaacttctatttc
aactttaataatcaacatttcagctctttaatacctgaagagatttgtcacctagcgttt
gtggcttctgttgaagcgacgtctgtttacgatgaaacgaatggtgggttcattccgtta
tcgaactctacagaactacctgactgcatggtttgtttggagagaatggatgaatcagta
caaggcgtgctcaccatattatgcaaccattcgttccacgcttcgtgtttaagacagtgg
gaggaccaatgttgccctgtgtgccgatacgttcaaacacctcatgcgcagtcgaacaac
aagtgcatggtgtgtgggagtgtggaagatttatggatatgtcttgtttgtggcaacgtt
ggttgtgggagatatacgtcggagcacgcacaacaacattacattgaaacgcaacataat
tatgcgatggcactcagcgataatcgggtgtgggattatgctggggattactttgttcat
cgtttgttccaaaacaaggaagatggaaagttagttgagaaaggaggggagcacgaggat
aaagtagaagggatgcaacttgagtgtatgtatctattgacaagccagcttgaatctcag
cgtaaatactgggaagatgaggtgaataaagctgaaattcaaggtgtcaagaaatatgag
gagataaataaacaacttgaaactacaatgatggaatgtaaggggttgggaaaaaaggtt
gaagatttggaaaaagagaagcaaagtttgaaacatcgcaaccaacagttaagcaacaag
tttacagaaactcttgctgatctttctaatgaaagggaacttaataaaagtttggttcat
aatcaggatgtttggaaatccaaagttatcgcgttggaagaacaaagtttgaaacaaaag
aaagaaatcgatgatttacgtgaagaacttcgtgatgtcatgttttatatccaagcgagt
caaactatcgagaaagaaggaggagggatgcgagaggacatcaggggaggacagatcctc
gtaggtccgggaacctccagtggaggagaccagaagaagagaggaaagaaaaaaagatga
DBGET
integrated database retrieval system
