Ciona intestinalis (yellow sea squirt): 100170046
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Entry
100170046 CDS
T01056
Symbol
zf(ubp)-1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 5
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cin01002
]
100170046 (zf(ubp)-1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100170046 (zf(ubp)-1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cin04147
]
100170046 (zf(ubp)-1)
Enzymes [BR:
cin01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100170046 (zf(ubp)-1)
Peptidases and inhibitors [BR:
cin01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100170046 (zf(ubp)-1)
Ubiquitin system [BR:
cin04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100170046 (zf(ubp)-1)
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100170046 (zf(ubp)-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA_7
UBA
zf-UBP
UCH_1
UBA_9
DUF5869
DUF3400
Motif
Other DBs
NCBI-GeneID:
100170046
NCBI-ProteinID:
XP_002122471
LinkDB
All DBs
Position
1:complement(9830801..9840226)
Genome browser
AA seq
837 aa
AA seq
DB search
MPDTDLLVPLLPCVRVPGLGDNVYKEECCFSFDTPKSDDGLYICLSTFLGFNRKYVELFH
ETTGHKLFLHMKQIKKILPKSEEASPVEKKKPKRLAIGIEGGFDAANGEKIEYEDVNELV
ILPEFKVIGLDNIEEIPSVVLASVSGILASTSASKKEEELSWDGEIRPVSKHAENLQQLD
NGVKIPPSGWKCCKCDLTSNLWLNLTDGKILCGRRYFDGTGGNNHAVDHFKETKYPLAVK
LGTITAFGADVHSYDEDTMVEDPHLAKHLSHFGINMMNMQKTEQTMTELEIELNEKVGNE
WDLIQESGKNLKQLQGPGLVGLNNMGNTCYMNSVIQVLYSIPEFMERYTTEDRCRDLFKR
KLSTLANLHSNGWSAAKASNEIQNRVLESSGDFSIQLCKLGLALTSPDMLKHQDSTKQEV
TSCSVTPRTMKRIVGRGHPEFSTNRQQDTHEFLLHVLSVIERSEHKNGSVSPGEVFRFMV
EDRIECQASKQVRYTKRSDYALALPIPLEAAANKAAVGEYQAVVEANKKDVSVKVGEVVR
LSIPYTACIEAFAHDELIQDFWSSAVKEKAEAKKRTRFVTFPDYLVVQMKKFTVGEDWVP
KKLDVSVEMPDILNLNDLRGGGLQKDETLLPDIEPPSAPPSEPLIEIDEEAVIAISQMGF
PLARCREALVATGNMGVEAAVMWLMENNTPEPAGAAAAQPSGASDGNVASIVAMGFTEGQ
AKKALHATGNNLERAADWIFSHLDELDSIEVDTPLEPANQVAAGDTPMDTSANHLKDGSG
NYELFAFISHMGSSTMCGHYVCHIKKDGRWVIFNDEKVAESEQPPKDLGYIYFYKRA
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatactgacttgttggtgccactgctgccttgtgtgagggttccagggttggga
gacaatgtttataaagaagaatgctgcttctcatttgatacaccgaaatctgatgatggt
ttatacatctgtttgagcacttttcttggtttcaatcgcaaatatgttgagttattccat
gaaactactggccataaactttttcttcacatgaagcaaataaaaaagattttgccaaag
tcagaagaagcatctccagtcgaaaaaaagaaaccaaaacgacttgctattggtatagaa
ggtggttttgatgcagctaatggtgaaaagattgaatatgaagatgtcaatgaacttgtt
attctacccgagtttaaagttattggtttagataacatagaggaaatcccatcagtggtg
cttgccagtgtcagtgggattcttgcttcaacttctgcatcgaaaaaagaagaagaatta
tcgtgggatggagaaataagacctgtgtcaaaacatgcagagaacctacaacaactcgat
aacggggtaaagattccccctagtggctggaaatgttgcaagtgtgatttaacatcgaac
ttgtggttgaatttaactgatggaaaaattttgtgcggtcgacgttactttgatggaaca
ggaggaaataatcacgctgtggatcatttcaaagaaactaaatatccacttgccgtgaag
cttgggaccatcactgcttttggtgcagacgttcactcatatgatgaagacaccatggta
gaagatcctcatcttgctaaacatctttcacattttggaatcaacatgatgaatatgcag
aagacagaacaaactatgacggaactagaaattgaattgaatgaaaaagttgggaacgaa
tgggatctcatacaagagtcaggaaaaaatctaaaacaactccaaggtcctggtttggta
ggtttgaacaacatggggaacacgtgttatatgaactctgttatacaagtcctatatagc
ataccagagtttatggagaggtataccacagaagataggtgcagagatttgttcaagaga
aagttgtcaacactggctaacctacattctaatggttggtctgctgcaaaggcttcaaat
gaaatccagaatcgagttttagaatcctcgggtgacttctcgatacaattatgcaaatta
ggtcttgcacttacttcaccagacatgttgaaacatcaagattcaacaaaacaggaagtg
acctcgtgctctgtgaccccacgaaccatgaaaaggattgtgggtaggggtcacccagag
ttttccaccaacagacagcaagatacgcatgagtttttacttcatgttctctcagtaatc
gagcgttccgaacataaaaacggatcagtttctccaggagaggtgttcaggtttatggtg
gaagacaggattgagtgtcaagcaagcaaacaggttcgttacaccaaacgtagcgattat
gctcttgctctaccaataccccttgaagctgctgctaataaagctgctgtaggtgaatac
caagcagtggttgaagcaaacaagaaagatgtttcagttaaagtgggcgaggtggttcgt
ctttctataccatacacagcttgcattgaagcgttcgcacacgatgaacttatccaagat
ttttggagctcagcagtaaaggaaaaagcagaagcaaagaaacgaactcgattcgtgacg
tttcctgattatctcgttgttcaaatgaagaagtttacagttggggaagattgggtgcca
aagaaattagatgtcagtgttgagatgccggacattttaaacttaaacgacctccgaggt
ggggggttgcagaaagacgagacgcttctccccgatattgagcccccttcagccccccct
agtgagccgttaatcgagattgacgaggaagccgtgatcgcgatcagccagatgggattt
cccctagcccgatgccgtgaggcgctggttgccacgggtaacatgggtgtggaagccgca
gttatgtggttgatggaaaacaatacgccagagccagcaggtgcagcagcagcacaacct
agtggagcaagtgacgggaacgtagcttcgattgttgcaatggggtttaccgaaggtcaa
gctaagaaggctcttcacgctacaggcaataaccttgaaagagcagctgattggatattt
tcacatctcgacgaattagattcaattgaggtggacactccccttgaaccagccaatcag
gtggcagctggtgacacacccatggatacaagcgccaaccatttaaaagatggttcagga
aattacgaattgtttgcatttattagtcatatgggaagttctaccatgtgtggacattat
gtgtgtcatattaaaaaggatgggaggtgggtgatatttaatgatgaaaaagtagctgaa
tcggagcaaccaccgaaagatcttgggtatatctatttctacaagcgagcgtga
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