Ciona intestinalis (yellow sea squirt): 100170050
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Entry
100170050 CDS
T01056
Symbol
zf(ring/c6hc)-6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF31
KO
K11974
E3 ubiquitin-protein ligase RNF31 [EC:
2.3.2.31
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100170050 (zf(ring/c6hc)-6)
Enzymes [BR:
cin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
100170050 (zf(ring/c6hc)-6)
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
100170050 (zf(ring/c6hc)-6)
Multi subunit type E3
LUBAC complex
100170050 (zf(ring/c6hc)-6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
E3_UbLigase_RBR
IBR_1
UBA_HOIP
PUB
IBR
PPARgamma_N
Motif
Other DBs
NCBI-GeneID:
100170050
NCBI-ProteinID:
XP_009860551
Ensembl:
ENSCING00000004526
LinkDB
All DBs
Position
Unknown
AA seq
1324 aa
AA seq
DB search
MTSELQSAQNTLFQRVRVGQAKSAEVFGHVNKILRNSSSLTSRYFKVNVVKFLQDNCQAY
VTDLTVGLGILEKYGKNLIKDEKPPQWRVVRFSNQIFHSKVDTIKGARDILNLMGYTTPV
RDGLSFPNHVIEPDINNVVMVTSDIILLKFELLLIDNAEHPKPQDINSYRQPPRKMSSPA
VKASSLNMRNTTDTVLRRNIGSPRASPTMLDDLCVVCGQKQAELHCKTCDNKQCKQCDKI
WHQCSNRLDHVRIEVTRQSLALHGVSTTVQQTPTHNNQTIQQNNGHVPQQTAVRQTSNRP
GQGYGSTSEDTWEEKINKKVEDFLCISDENKRREKVYQFCSEIETQINVFKSGASRLSNL
SSITKHLVERASLLASRKNEMLSLFGLEDPHRRSSPSTSLNVDEDRIESPSFYQHNDTST
NNQHFTTKHQHATNIQPTVFNNQHISTRNQHVEATNAPGLTNTQHTPTVQQVLSTNQHTA
TNIQHVATLYQHPSKTNQHQLALINNNQHFQHGPSSYPPILSTIQHIPPTNQHVAPTNRQ
VLSTNQQVLPSYQHTQQPYQHFPSNYPQNPPNNQLAQISIATPPPSSRYTPHDILQNNEN
SSSLFHEVRGPPEICYMPDSFDKLLPPSGPNSTEPKHLNNSQTDNFAAKVENRQPDSEIQ
THYQCEETSGQESDNFSLPDLHDVSYTQDIEVFTTYDQVISCVDIEPSSMNVRELEQQTK
KEDIRLNCLLMVGNLREAEREGFSPKQVEIAIKQLKTSSNNNMMGNPVQWLKDNWMNKVV
SLTAQHPLFNVEEVSDLLVESEFDENELNAKLKLRKLAKIEAVNTSGEYLVDDYERYLLD
HHGDVNQTIRELQQQLLQSIHRRLRDIEENETKITDFIQITEETRAKNALASYFLCDNDI
ILSMIYRILHSNITKVEDYLNECNIDDLMEAARSFPDDYEAAVKFLGNECKICFKNFPKS
KIECMPTCTDIECKYCRGCLHEYLRHKINETPRYVRHIVCPVCLQPDMDEDGESVENYLN
HLDALIRRGLDDATYQLFQKKLRDQTLMKMPNFRWCAHCVNGFLYEQQENNLKMVCSACG
KATCYDCKKPWEDQHEGISCNEFQQWKEMNDPDSQAAGLAAHLKEHGIDCPNCKFRYALS
KGGCIHFKCSTCSFEFCRGCKGSFKQGRRCTLFRTCQNKGLHAHHPRDCLFYLRDLEIER
LQKILQDGGIPHRTECTISNNTCQVMEQQETPDGLIDACCGGEVHENNADLCEVHYKEYL
VILINKNHLDPATVFTGDELETCLHREEHPMPHKQDMNDEQYHEKLLSIVCTYPLIHTKL
QMQQ
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgacatctgaactacagtcagcacaaaatactttattccaacgcgtccgtgttggccaa
gcaaaaagtgcggaagtttttggtcatgttaataaaatattgaggaattcaagtagtttg
acatcgagatatttcaaagtcaatgttgtcaagtttctgcaggataattgccaggcgtat
gtcactgacttaactgttggtttgggaatccttgagaaatatgggaagaacttgattaaa
gatgagaaacctccacaatggagagttgttcgcttttcaaaccaaatatttcactccaaa
gttgatacaattaagggtgccagagatatccttaacttgatgggctacaccacaccagtg
agagacggtttatcttttcccaaccatgtgattgaacctgacataaataacgtggtgatg
gtaacatcggatatcatattgctcaagtttgagttattgctcattgacaatgccgagcat
cctaaaccacaagatattaactcctacaggcaacctccacgcaagatgtcatccccagct
gtaaaagcaagttcactaaacatgagaaatacaacggatactgtgctacggagaaacatt
ggttctccacgtgcatcgcccacaatgttggatgacttatgtgtggtttgtgggcagaag
caagcagagttgcattgcaagacatgcgacaacaaacaatgcaaacaatgtgacaagata
tggcatcaatgttcaaacaggcttgatcatgttagaattgaagttacacgacagtcactg
gccctacatggtgtgtcaactactgtacaacagacaccaacacataataaccaaacaatt
caacaaaataatggacatgtaccacaacaaactgctgtgagacaaacatctaatagacca
ggccaaggttacggaagtacaagtgaagacacatgggaagaaaaaatcaacaaaaaagtt
gaagactttctttgcatatcagatgaaaataaacggagggaaaaagtttatcaattctgt
tccgagattgaaacccagataaatgtttttaaaagcggggcaagtcggctctctaactta
tcttcaatcactaagcatttggttgagcgagcaagtttattggcttcgaggaaaaatgag
atgttgagtttatttggtttggaagatccacacagaagaagtagtccgtcaacttcatta
aatgtggatgaagatcgaattgaatcgccgtctttttatcaacataatgatacatcaaca
aataatcaacattttacaacaaaacatcaacatgcaacaaatattcaacctactgtattc
aacaatcaacacatttcaacaagaaatcaacatgttgaagcaactaatgcacctggatta
acaaatacccaacatacacccaccgttcaacaagtcttatcaacaaatcaacacactgca
acaaatattcaacatgttgcaacactttatcaacatccttcaaaaaccaatcaacatcaa
cttgctttaatcaacaacaatcaacactttcaacacggcccatcaagttacccccctatt
ttatcaacaattcaacatatcccacccacaaatcaacacgttgcgcccacaaatcgacaa
gttttatcaacaaatcaacaagttttaccaagttatcaacacacgcaacaaccttatcaa
cactttccatcaaattatccacaaaatccaccaaataatcaacttgcccaaataagcatt
gcaacccccccaccctcaagtcgctacaccccccatgatattctgcaaaacaacgaaaac
tcttctagtttgtttcatgaagtgagaggccccccagaaatttgctacatgcccgatagt
tttgataaactacttccaccatcaggtcccaactcaacggagccaaaacatttgaacaac
tcgcaaactgacaattttgctgcgaaagtggaaaacagacaacctgattcagaaatacaa
acccactaccagtgtgaagaaacatctggccaagaaagtgacaatttttccctccctgac
ctacatgatgttagttacacacaagatattgaagtgtttacaacatacgatcaagttata
tcatgcgttgatattgagccttcatctatgaatgtaagggaacttgaacaacagacaaag
aaggaagatataagattaaattgcttgctaatggtgggaaatctcagggaagcagaaaga
gaaggtttctcaccaaaacaagttgaaatagcgatcaaacaactcaagacaagcagtaat
aataatatgatgggcaatccagttcagtggctgaaagataactggatgaataaagttgtt
agtttaactgcacagcaccccctgttcaatgttgaagaagtcagtgatttattggtcgaa
agtgaatttgatgaaaatgaattaaacgcaaagttgaagctgagaaaattggcaaagatt
gaagctgtgaacacatcaggagaatatttagtcgatgattatgaacgatatttacttgat
caccatggtgatgtcaatcaaactattcgtgaattacaacaacaattacttcagtctatt
catcgtagattaagagacattgaagaaaatgaaacaaaaataacggattttattcaaata
actgaagaaacaagagcaaagaatgcattagcgagttattttctttgcgacaatgacatt
atattgagtatgatctacaggatactacatagcaatataactaaagttgaagactattta
aatgaatgtaacatcgacgatttaatggaagcagcaagatctttccccgatgattatgaa
gctgccgtcaaattcctgggaaacgaatgcaagatatgttttaaaaacttcccaaaaagc
aagatcgaatgtatgccaacgtgcacagatatagaatgcaagtattgtagaggatgtttg
catgaatacttaagacacaagataaacgagacaccacgttacgtgcgtcatattgtgtgt
cccgtgtgcttacaaccagatatggatgaagacggagaaagcgtggagaattatttgaat
catctcgatgcgcttatccgaagaggtttggacgacgcaacttatcagttgtttcagaaa
aagttgcgagatcaaacactgatgaaaatgccaaactttagatggtgcgctcattgcgtc
aatggctttctatacgagcaacaagaaaacaatttgaaaatggtttgttctgcttgtggc
aaggccacatgttacgactgtaagaaaccatgggaagaccaacatgaaggaatatcttgc
aatgaattccaacaatggaaggagatgaacgatccagattcacaagcagcggggttggcc
gctcatttaaaagaacatggcatcgattgtccaaactgtaagttcagatatgccttaagt
aaaggtggttgcattcatttcaaatgctccacttgttcattcgaattctgtcgtggatgt
aaaggatctttcaagcaaggcagaagatgcacattattccgaacatgccaaaacaaaggt
ctgcacgcgcatcatccaagagattgtttgttctaccttcgagatttagaaattgaaaga
ttgcagaagattcttcaggatggtggaataccacatagaacagaatgtacaatctcgaac
aatacttgccaggtgatggaacaacaagaaacccccgatggattgatcgatgcttgctgc
gggggcgaagtgcatgagaataacgcagacttgtgtgaagtacattacaaggaatatttg
gtgattttaatcaacaagaaccacttggaccctgccacagtgttcacaggagatgaatta
gagacatgtctgcacagagaggaacatccaatgcctcataaacaagacatgaacgatgaa
caatatcatgagaaattattatccatagtttgcacttaccctcttatacatacaaagttg
caaatgcagcagtga
DBGET
integrated database retrieval system
