Ciona intestinalis (yellow sea squirt): 100170051
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Entry
100170051 CDS
T01056
Symbol
zf(ring/c6hc)-1
Name
(RefSeq) E3 ubiquitin-protein ligase RNF19A
KO
K11972
E3 ubiquitin-protein ligase RNF19A [EC:
2.3.2.31
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100170051 (zf(ring/c6hc)-1)
Enzymes [BR:
cin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
100170051 (zf(ring/c6hc)-1)
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
100170051 (zf(ring/c6hc)-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
Motif
Other DBs
NCBI-GeneID:
100170051
NCBI-ProteinID:
XP_009862048
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
MSSMSDSQSASSSTKKRRRLFRLPWRRRLRCCGSNNEYRRSNSSSLEDIPSTSKESKVLS
QQGVPPAHVFEAAVSVHQTYKSGSQSIGSTSEPDKQNTLECPLCLVAQPVKNFPLLSTCP
HRSCSECWVQYLTIEITESRVNLMCPECQERLHPSDMQTILSHEPELVRKWEEFTLRKTL
SVDPDCRWCPAPDCGYAVIAHGCASCPKLQCGRPGCHTYFCYHCRQEWHPNQTCDAAHLQ
RTRQVRVRSNSLTYSQGSSMHDDIKPCPKCGALIVKMNDGSCNHMTCAVCEVQFCWLCLQ
EITDLHYLSPSGCTFWGKKPWSRKKKILWQLGLLVGAPLGIGLVAGLAIPAIIIGMPVWV
ARRIIAQFENREVSKYKRNILVALCATGTFIISPAVAALAVGIGIPVMLVYVYGVVPFSL
CRSGSYGLPGQNNSNVPSLPAGFPFDLGPPGVQPEVTPTDDNPNFHGADGSLNARLAAIN
PSIGEASVGGITMGSLNTSHGSNMDKVGRVDHDGASTVAMAGTSITGSISGLSGTACTLS
TNRETQETDQQSTHTQTSVGSAHNFTAVQVHMNDSVSEKSSQSVASSNLVSETKTSHYGK
PIGAKRKTKHAKRSSSSSNKHPVVTPTCDEARGVPLVEEAVQQHPPQGGSNALTQTNVLT
IVNECETIPPKSNEGSISSCNSNSALLCHTVDENKDTQV
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtatgtctgacagccaatcagcatcgagctcaacaaagaaacgacgacgattg
ttccggttaccatggagacgaagattacgatgctgtggaagcaacaacgaatatcgaaga
tcaaactcgtcaagtttggaagatatcccgtcaacttctaaagagtcaaaagttttatca
caacagggagttccccctgctcatgtattcgaagctgcagtgtctgtacatcaaacttat
aaatctggatcccaaagtattggaagcactagtgaaccagacaaacaaaatactttggaa
tgccccctgtgtcttgtagctcaaccagtgaaaaactttccattgttatcaacgtgtccc
catcgttcgtgttctgagtgctgggtgcaatatctgaccatagaaataacagaatcaaga
gtgaacctgatgtgccccgagtgtcaggagcgacttcatccttccgatatgcagaccatc
ctcagtcatgaaccggagttggttcgtaaatgggaggaatttactttgagaaaaactttg
tcggtcgatcctgattgtcgatggtgtcctgctcctgactgtgggtatgctgtgatcgcc
catggttgtgcaagttgccccaaactacaatgtggaaggccgggttgtcatacttacttc
tgctaccattgtagacaggagtggcaccccaaccaaacatgcgatgcagctcacctgcaa
cgaacccgacaagtccgtgtacgatcaaactcattgacgtatagccagggatcctccatg
catgacgacattaaaccatgcccaaaatgtggagctttaatagttaagatgaacgatggt
tcatgcaaccatatgacgtgtgctgtgtgcgaggtccagttctgttggttgtgtttacaa
gaaatcactgaccttcattatttaagtccatctggttgcactttctggggcaagaaacct
tggagtcgtaagaagaagattctgtggcagcttggtttgttggttggcgcaccccttggt
atagggttggtggctgggttggccatccctgccattatcattgggatgcctgtgtgggtg
gctaggaggataatagctcagtttgagaatcgtgaggtctcaaaatacaagcggaacata
ttagttgcgttatgcgcgacaggaacctttattatttcacctgcagttgcagctcttgct
gttggcatcggcatccctgttatgttggtttacgtttacggagtcgtcccgttctcatta
tgtcggtcgggtagttacggactccctgggcagaacaattcaaacgtaccctctttacca
gcggggttcccctttgacctggggcctcctggggtccaaccagaggtcacccccaccgac
gacaaccccaactttcacggggctgatgggtcacttaatgcacgattagctgccatcaac
cccagcattggagaagcaagcgtgggtgggattactatgggtagtttgaatacatcgcat
ggtagtaacatggataaagtgggaagggtggaccatgatggggcgagtactgtagctatg
gcaggtacgagcatcactggtagtatctctgggttgagtggaacagcttgtactttgagc
acaaacagagaaactcaggaaacggatcaacaatctacccatacacaaacatctgttggg
tctgctcataatttcacagcagttcaagtccacatgaatgattctgtgtccgagaaaagt
tcacaaagtgttgcctcgtccaacttggtatcggagaccaagacctcacattatgggaaa
cccatcggtgcaaagaggaaaaccaagcatgctaaacgttccagcagttcatccaacaaa
caccccgtagttaccccaacatgtgatgaagctcgtggtgtccctctggtggaggaagcg
gtgcaacaacacccaccacaaggtggtagcaacgcactaacccaaacaaatgtgctcact
attgtaaacgaatgtgaaacgatccctcccaagtccaacgaaggtagtatcagtagttgt
aacagcaacagtgctctcttgtgccacacagtggatgaaaacaaggacacccaagtatag
DBGET
integrated database retrieval system
