Ciona intestinalis (yellow sea squirt): 100170066
Help
Entry
100170066 CDS
T01056
Symbol
zf(cxxc)-5
Name
(RefSeq) LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase 1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00270
Cysteine and methionine metabolism
cin01100
Metabolic pathways
Module
cin_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
100170066 (zf(cxxc)-5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
100170066 (zf(cxxc)-5)
03032 DNA replication proteins [BR:
cin03032
]
100170066 (zf(cxxc)-5)
03036 Chromosome and associated proteins [BR:
cin03036
]
100170066 (zf(cxxc)-5)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
cin02048
]
100170066 (zf(cxxc)-5)
Enzymes [BR:
cin01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
100170066 (zf(cxxc)-5)
Transcription factors [BR:
cin03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
100170066 (zf(cxxc)-5)
DNA replication proteins [BR:
cin03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
100170066 (zf(cxxc)-5)
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
100170066 (zf(cxxc)-5)
Prokaryotic defense system [BR:
cin02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
100170066 (zf(cxxc)-5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
DNMT1-RFD
BAH
zf-CXXC
PUA
Motif
Other DBs
NCBI-GeneID:
100170066
NCBI-ProteinID:
XP_018671874
LinkDB
All DBs
Position
Unknown
AA seq
1307 aa
AA seq
DB search
MSKEGDVSCSSEGKKQPTILDMFARKSKRKAPTKSPRGDSQVVTPDGKKPRRDRDVSDKE
NEKPGIKVEVKKSSMKCRECRQLLDDVAIFGGDVDQAEEEFVLLTHESLSLFVGNEETGR
PQHKITDFTVYDKSTHLCPFDAGLIEKNVELYFSGLVKPIYDEDPGVGTGIPGKRLGPIN
EWFTAGFDGGEKALVGFSSAFADYFLMEPSHAYAPLWASIQEKIHMSKIVIEFLSDVPDA
DYEDLVNRIQTSVPPPTLGVAKFTEDSLLRHAQFVVEQVESYDNARSDEEDSLLGTTCVR
DLIHLAGVTLGKRRVARRSAVVKEKAMKASSTKATTTRLVAEVMEKFFGGTVDVTTGNKI
RRRRCGVCEACLKPECGKCTSCKDMVKFGGGGKLKQTCIDRRCPNLGLDLMEDSDPDDKD
EKVKPSPSKMKVIKAGKVTTSWVGEALYEEGGKVYYPGVRVGGDVIEGGECVSVKNKDEG
GLPYIGRVVYMWGESGGKMVHVDWFMRAADTILQETSQPDELLIIDECDDLSVECIAGKV
DVSHRVPHQNWSFMGGVEEQHPTTDGVSSFYYQKMYVPEFARFVDPPSNEPTDDPDFCPS
CVRINEGKMRQVAVGKNELKRENGKIFYEFVCKDGVEYGVGDSVYLSVETYSFKSKNKHK
KQVLPKSLDEIDEDEYPEFYRKGGYVKGSNLEVAEPFRIGRINEIFGGKKXSISLVVTKF
YRPENTNKPLKSNSYCDLNLLYWSNDKVEVDFSFVEGKCEVECELDLSVTVAEYSRKAAN
RFYFSEVYNEEDGTFTVPPSTARRSGVELLKQKAKGVKPKLTKMNKMMKKDETIVGEDET
KIPKLRSLDVFSGCGGLSEGFHQAGIAEPSYAIELWEPAAQAYRLNNPGATVFTEDCNVL
LEMVMNGEERSKCGQRLPQKGDVELLCGGPPCQGFSGMNRFNSREYSRFKNSLVVSYLSY
CDYYRPRFFLLENVRNFVSFKNCMVLKLSLAALLRMGYQCTFGVLQAGHYGVSQTRRRAI
ILAAAPGEQLPLYPEPLHTFSTRGGSLSAQVGDTRYTNNIKWSTSAPYRTITVHDAMSDL
PKIPNGHAKLEMPYTGEPLTHFQRMMRGKDYQGVVRDHICKDMSPLVAARMALIPLIPGS
DWRDLPNKPHKLSDGTTAKVLRYEYHDKKQGRSSTGGMRGVCSCAEGRACDAMDRQFNTL
IPWCLPHTGNRHNNWAGLYGRLCWDGFFSTTVTNPEPMGKQGRVLHPQQHRVVSVRECAR
SQGFPDSYRFFGSILDKHREVGNAVPPPMSKAIGLQIKKSLEWKVQQ
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaggaaggtgacgtcagttgttcaagtgaaggaaagaaacagcccaccattctt
gatatgtttgcgaggaaaagtaagcggaaagcccccacaaagtccccacggggggattcc
caggtggtcacccccgatggtaagaagccccgaagggaccgcgatgtttccgacaaagaa
aacgaaaaacccgggataaaagttgaggtaaagaaaagttcgatgaaatgtcgggaatgt
cggcaattattggacgacgttgcgattttcggcggcgacgtcgatcaagctgaagaggag
ttcgtgttgttgacacacgagtcgttgtcgttgtttgtggggaacgaggaaacagggcga
cctcaacataagataactgatttcacggtatacgacaagagcacccacttgtgtccgttt
gacgccggtttaatcgagaagaatgttgagctttactttagtgggctggtgaagccgatt
tatgacgaagaccccggggttgggacggggattcccgggaaaaggttggggccgatcaat
gagtggtttacggcaggctttgatggcggagagaaagctctcgttggattctcgtcggcg
ttcgctgattatttcctgatggagccgtcacacgcttacgcccccctgtgggcgagtatt
caagagaaaatccacatgagtaaaattgtcatcgagtttctctcggatgtccccgacgca
gattacgaagatctcgtcaatcggatccaaacatctgtccctcccccaacactaggtgtc
gccaagttcaccgaggattcgttgcttcgtcacgcccagtttgtggtcgaacaggttgag
tcgtacgacaacgcacgatcggacgaggaagattctttacttggaaccacatgtgttagg
gacctcatccatcttgctggggtaacgttgggtaaacgacgggtggcgcgtcgctcggct
gtcgtgaaggagaaagctatgaaggcatcatctacgaaagccaccaccacgaggttggtc
gccgaggtgatggaaaagttcttcgggggaacggtggatgtaacgaccgggaataaaata
agacggaggaggtgcggggtttgcgaagcttgtttgaaaccagaatgtgggaaatgtaca
tcgtgtaaggacatggtcaagtttggtggcgggggcaagttgaaacagacgtgtatcgac
cgaagatgtcccaacttggggctggatttgatggaggattcggatcccgacgacaaagat
gaaaaagtgaaaccgtcaccgtcgaagatgaaagttatcaaagctgggaaggtcacgacc
tcatgggtgggggaggcgttgtatgaggaggggggtaaagtatattaccccggggttcgg
gtggggggtgatgtcatagaggggggtgagtgcgtatcggtaaagaacaaagatgagggt
gggttgccgtacattgggagggttgtgtatatgtggggagaaagtggggggaagatggta
cacgtggattggttcatgagagctgctgatacgatattacaagaaacctctcaacccgat
gaacttttgatcatcgatgaatgcgacgacttatcggtggaatgtatcgctgggaaagtt
gatgtgagccatcgcgtcccgcatcagaattggtcgtttatgggaggcgtagaagaacaa
cacccaacaacggatggtgtttcgagtttctactaccagaagatgtacgtgcctgagttt
gcgaggttcgttgacccaccatccaacgaacccaccgatgaccccgacttttgccccagt
tgcgttcgtattaacgaggggaaaatgagacaggttgcggtcgggaagaatgagttgaaa
cgagaaaacggaaaaatattttatgagtttgtttgtaaagacggggttgagtatggggtt
ggggattccgtgtatttgtccgtggaaacatattcctttaaatcaaagaacaaacataag
aaacaagttttgccgaaaagtttggacgagattgacgaagatgaatatccggagttttat
cggaagggaggttatgtgaaggggagcaacctggaggtggccgagccgtttcgcatcggg
aggatcaacgagatatttggggggaagaagnggagtataagtttggttgtcacaaagttt
tatcggccggaaaatacaaacaaaccgttgaagtcgaactcgtattgtgacctcaacctg
ctgtattggagcaatgataaagttgaggtcgatttcagtttcgtggaaggaaaatgtgaa
gttgaatgtgagttagacctcagtgtcactgtggctgaatattcaaggaaagccgcgaac
aggttttacttcagcgaggtttacaacgaggaagacggaactttcaccgtacccccgtct
actgcgaggaggtcaggggtcgaactgctcaaacaaaaagctaaaggagtaaaacccaaa
cttaccaagatgaacaaaatgatgaagaaagatgagacgattgtgggggaagatgagaca
aagatcccgaagttacgatcgttggatgtcttctcggggtgtggggggttatcggagggg
ttccaccaagcggggattgccgaaccatcgtatgccattgaactgtgggagccggctgct
caagcgtatcgcctcaacaaccccggggcgaccgtgtttacagaagattgcaacgtgttg
ttggagatggtgatgaacggagaagaacgcagtaaatgtggccaacgactgccacaaaag
ggcgatgtggagttactatgtgggggacctccatgtcaaggtttcagcggaatgaatcga
ttcaactcgagggaatactcgaggttcaagaattcacttgtcgtgtcgtatctgtcttat
tgcgattattatcggccgagattctttttgttggaaaacgttcgaaactttgtttcgttc
aagaactgtatggtgttgaagttgtcgcttgctgctttgttaaggatgggttaccaatgt
accttcggggtgttgcaagcggggcattacggagtgtcacaaacccgtcgtcgagctatt
atactcgctgctgcccccggtgagcaactaccattgtatcccgaacccctccacactttc
tccacacgagggggcagtttatccgcgcaggtcggcgacacgaggtacacgaacaacatc
aagtggtcgacgtcggctccgtatcgaacgatcaccgtgcacgatgcgatgtcggatcta
ccaaagataccaaacggacacgccaaacttgagatgccatacacaggagagccattaacg
cactttcaacggatgatgcgcggcaaggattatcagggtgtcgtacgcgaccatatttgt
aaagacatgagccctctagtggcagcaaggatggctctcatcccgttaatccccggctcc
gattggcgcgaccttccaaacaaacctcacaaattatccgacggcacgacggcaaaagtg
ttgaggtacgaataccatgacaagaaacagggtcgcagctcgacgggaggcatgaggggc
gtatgttcgtgcgctgagggtcgagcatgtgacgccatggatcgtcagttcaacactttg
ataccatggtgtctcccacatacaggcaaccgacataataactgggctgggttgtacggt
agattgtgttgggacggattcttcagcacaacggtcaccaaccctgaacctatgggtaaa
caggggagggtgttgcatccacagcaacaccgtgtggtgagcgtgagggagtgcgcacga
tcacaagggttcccggattcgtatcgtttcttcggtagtatacttgacaaacatcgcgag
gttggcaacgcggttcccccccccatgtccaaagctatcggattgcaaatcaagaagtca
ctcgagtggaaagtacaacaatga
DBGET
integrated database retrieval system
