| Entry |
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| Symbol |
zf(parp)-3
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| Name |
(RefSeq) poly [ADP-ribose] polymerase 1 isoform X1
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| KO |
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| Organism |
cin Ciona intestinalis (yellow sea squirt)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cin00001]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100170069 (zf(parp)-3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:cin03032]
100170069 (zf(parp)-3)
03036 Chromosome and associated proteins [BR:cin03036]
100170069 (zf(parp)-3)
03400 DNA repair and recombination proteins [BR:cin03400]
100170069 (zf(parp)-3)
Enzymes [BR:cin01000]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
100170069 (zf(parp)-3)
DNA replication proteins [BR:cin03032]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
100170069 (zf(parp)-3)
Chromosome and associated proteins [BR:cin03036]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
100170069 (zf(parp)-3)
DNA repair and recombination proteins [BR:cin03400]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
100170069 (zf(parp)-3)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
11:2675564..2690426
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| AA seq |
970 aa
MDENDLPYLAEYAKSSRASCKLCMSHIEKDSLRIALMVQSRHFDGKQPNWHHYTCFFGRC
RPKFVDEISKFHNLRWDDQEKIRAQIERGGGGGPSKKSSKKTLQDFVVQYALSNRSTCKK
CEEKIEKDEIRISHKEIDPEKPQVGLIDRWHHVGCFIKSRKDLGWIDGQFTSDMLKGFKG
LDSEDRATISKHLDKKKKGKKKTKIVKEEEENDENLDAMNKLLRDQSAKLWKMIDHLKNM
DLKKKELVEILEENSQKVPKGLDKIFERVADGMLFGRLPLCTLCGDGQLVASSRGFYQCV
GNISGWTSCTNTTLDVKRSPWIIPQDLHEDFPYLKKYKYKPTVRIFPPRPKPKPLKDKKV
VIIGKLSKPRDELKQLVENLGGSVTTSLNKAYCCVTNQAEVETTNKRIKSAEIQDVFCVS
EEFLDCCKDLSTPLNSLLPFLKKYSLCPWGSERLNNAALKRSMAEESRSLSTKKQKLVVK
SGAAVDPESNLEDETEVLQHDGRSYTATLAMVDMKSGTNSYYKLQLLADTSGRSWHVFRS
WGRVGTSIGGTKVEKFRTLDNALQNFNEIYTEKTGNDFGSKDFVKQPHKFYPLEIDYGMD
DEKKVQHLDTAGKSSKLKQEVQDLVKMIFNIESMKKAMLEFEIDLNKMPLGKLSKRQMQQ
AYLVLNEVNELVTAGDHGSGKVLDCSNRFYTLIPHDYGVHQPPLLDNLDIIKAKTEMIDN
LIDIEVAYNLLTTTTEDTQTDPLDLSYEKLQCDILPLDKDSEEFKMVEKYTQLTHASTHN
QYKLTIEHLFKINRKGELSRFRPFQSLPNHKLLWHGSRMTNYAGILSQGLRIAPPEAPVT
GYMFGKGLYFADMVSKSANYCSTSSRNPIGLALLADVALGNPYELKYAKDVRKLPKSKHS
VIGLGKTVPDPSTHITVDSNLVVPMGKGVEADLGKDKETSLLYNEYIVYDVAQVNLKYLV
QFKFHYNTLW |
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| NT seq |
2913 nt +upstreamnt +downstreamnt
atggatgaaaatgatctgccgtacttggccgagtatgcaaaaagcagtcgagcatcgtgc
aaattatgtatgagccacattgaaaaagattcgctgcgaattgcattgatggtacagtct
cgtcattttgacggaaagcaaccgaactggcaccattatacatgtttctttgggcgttgt
cgcccaaaatttgtcgatgagatctcaaagtttcacaatctacgttgggatgaccaggaa
aagattcgtgcgcaaattgagagaggcgggggcggaggaccctcgaaaaagtcctccaag
aaaactctacaggattttgttgtgcagtatgctctctctaacaggagcacttgcaaaaag
tgcgaagaaaaaattgaaaaagacgaaatccgaatctcacacaaagaaatcgatccagag
aagccgcaagtgggtttgattgacaggtggcaccatgttggttgtttcattaaatctcgg
aaagatttgggttggattgatggccagtttacctcagatatgctaaaggggttcaaaggt
ttggattcagaagacagagcaacaatttcgaaacatcttgataaaaaaaaaaaaggtaaa
aagaaaacgaagatcgtcaaagaagaagaagagaatgatgagaacttggatgcgatgaac
aagttgctgcgagatcagagcgcaaagttgtggaagatgattgatcatctaaaaaacatg
gatttaaagaagaaagaattagtcgagattttggaggaaaactctcagaaggttcctaag
ggtttggacaaaatattcgagcgagtagcagatgggatgttatttggtcgtctgccactt
tgtacattatgcggggacggacagctcgttgccagttctcgtggtttttatcaatgtgtt
ggaaatatatcaggatggacgagttgtacgaacacaacgttggatgtgaaaaggtcaccg
tggattattcctcaagacttacatgaagactttccgtacctgaaaaaatacaaatataaa
ccaacggttcgtatttttccgccaagacccaaacccaaacctctgaaagacaaaaaagtt
gttataattggaaaactttcaaaaccaagagatgaactgaaacaattagttgaaaacctt
ggaggttctgttacaacatcgcttaacaaagcttactgttgtgtaacaaatcaagctgaa
gtggaaactacaaataaaagaataaaatctgccgaaatccaagatgttttctgcgtttcc
gaagagtttttagattgttgcaaagatttgtccacccctctcaactccttgcttccattt
cttaagaaatattctttatgtccctgggggtccgagagacttaacaatgctgctttgaag
cgatctatggcagaagaaagcagaagtctttcaacaaagaaacaaaaacttgtcgtgaaa
tctggagctgctgttgacccagagtccaatcttgaggatgaaactgaggtgttacaacat
gatggtcgttcatacacggctacattagccatggtagatatgaagtctggaacaaattcc
tattacaagcttcagttgcttgcagatacttctggaagaagttggcatgtctttcggtca
tggggtcgagttgggaccagcattggtgggaccaaagtggaaaagtttcgtaccttggat
aatgctttgcaaaattttaacgaaatttacacggaaaaaacaggcaatgattttggtagc
aaagattttgtaaagcaaccccacaagttttacccccttgagattgattatggtatggat
gatgaaaaaaaggtccagcatttggacactgcaggaaaatcttcgaaattaaaacaagaa
gtccaggatctcgttaaaatgatatttaacattgaaagcatgaagaaggccatgttagag
tttgagatcgatttaaacaaaatgccactcggaaaactcagcaaacgtcaaatgcaacaa
gcttatttggttcttaatgaagtcaatgaattagtcacagctggtgaccatggaagtggt
aaagtattggattgttcgaaccgtttctacaccctcataccacacgactatggagtccat
cagccacccttacttgataacttggacatcattaaagccaagactgaaatgattgacaac
ctgatcgacatagaggtcgcttacaacttgctaactacaacaactgaagatactcaaact
gatccattggatctgagttatgaaaaacttcaatgcgatatactgccattggataaagac
agcgaggaattcaaaatggttgaaaaatacactcaacttactcatgcaagcacacacaac
cagtacaagttgaccatagagcatctgttcaagattaacagaaaaggtgagttgtcgaga
ttccgtcctttccaatcactaccaaaccacaagttactatggcatggctcgagaatgaca
aactatgctggcattttgtcccaaggcttaaggattgctccacctgaagcaccagtgact
ggttacatgttcggcaaggggttatatttcgccgatatggtttccaaaagcgcaaactat
tgttcaacctcctcaaggaatcctatcggcctcgctttacttgcggacgttgctcttgga
aatccgtacgagttaaagtacgctaaagatgtacgtaagcttccaaaatcaaaacacagc
gttatcgggttgggtaagacagtgcctgacccttctacacacattactgtggatagcaat
cttgtggtgcctatgggtaaaggtgtagaggcagatttaggtaaagataaggagaccagc
ttactatacaacgaatacatcgtatacgacgttgcacaagtcaacctgaagtacttggtg
cagttcaagtttcattataacactctgtggtga |
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