Ciona intestinalis (yellow sea squirt): 100170090
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Entry
100170090 CDS
T01056
Symbol
zf(c2h2)-65
Name
(RefSeq) zinc finger and BTB domain-containing protein 44
KO
K10515
zinc finger and BTB domain-containing protein 44
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
100170090 (zf(c2h2)-65)
04121 Ubiquitin system [BR:
cin04121
]
100170090 (zf(c2h2)-65)
Transcription factors [BR:
cin03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
100170090 (zf(c2h2)-65)
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
100170090 (zf(c2h2)-65)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2HE
zf-met
zf-C2H2_2
STL11_N
CpXC
Motif
Other DBs
NCBI-GeneID:
100170090
NCBI-ProteinID:
XP_002128993
LinkDB
All DBs
Position
Unknown
AA seq
752 aa
AA seq
DB search
MKMSGMSQMLNHREASHAQDSFARLNKLRREGILCDLTILVQGHKFKAHKTVMAACSDYF
LNAVCGGKSTASVTVSPAGHMTIEMQYVTMRGFAPLLEYAYSSELRANASDVIDVLSAAS
YMQMFNVANACSEFMRSNLLWTQGQSRLAALPMLAGRNMLLNGQIHGEHPATAPNPVSRP
NGLPEAMSSLLASSAMSGAAINGRNGLSQPPMLIPISSMTPYEVGLHWADTMAGTHNLLS
RFVNNQPVTTTRSPPSSISPSSHNSPAAGYDVVTSSAGPRGTEEGTTPSAEAAEKAEEPN
SESTYNNNNNNNNNNNEGLLPDKPSTGNNRKSIAVKLEANLDDSANNGTEDGTSSVTTPP
PDAEDSWQSLQRLYSFHCKPDSKVESDGDSNETRKNAINEIRNKALGELRSSSLSPSVIS
SISNAASIKSALDSIPRLDNAVSMVPRLTGLTVQNAILQRQKQIMEQQQQQREGEKLVAE
LPVVPPSGQYMSVRRRTLQSNVPKPHQCQICGSRFTRFHNLKQHIKLHSGIKPYECDECG
KRFTRNYTLRLHKMKHVGIRNFRCGTCDASFTSLGEFRAHLRITMHSHMPINGLNGNSPS
LMEPEDLSSAPAPQGVSKFNHFDAALLRYGVGSPGSSGGGAAGEGSTGTISPLGHGAMIP
GTGESPERSDRSLSGSPEDLSTKRPLSDIEDKHHESVETIAEYSDHDSTTQESNLDSPKR
RKLSGIPLYQESSQTENDEDEPMSLVIDTSRD
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgtccgggatgtctcaaatgctgaatcacagagaggcaagccacgcccaggat
tcattcgcaaggctaaacaaactacgtcgagagggcatactgtgcgacctgaccatccta
gtacagggccacaaatttaaggcacacaaaacagtaatggcggcttgtagcgactacttc
ttaaacgctgtttgtggggggaaatcaacagcgtccgtcaccgtttcacctgccggtcac
atgacaatcgagatgcaatacgtcacaatgagagggtttgctcctcttctagaatacgcc
tactcctctgagctccgcgcgaacgccagtgacgtcatagatgtattgtccgcagcgagt
tacatgcaaatgtttaatgttgcaaatgcatgttccgaattcatgcgctcgaatctcttg
tggacgcaaggacagtcccgactcgcagccttgcctatgctggcaggtcgtaacatgttg
ctgaacgggcaaattcacggtgagcatccagctactgcacccaacccagttagccgaccg
aatggcctccccgaagcaatgagcagtttactggcaagttctgcgatgtcaggtgctgcg
ataaacggccgtaatggcctttcccagcctcctatgttaatacctatatcttcaatgaca
ccgtatgaggttggactacactgggcagacaccatggcaggtacccataatttgctgtct
cgtttcgtaaacaaccaacccgttacaacgacccggtcgcccccgtcatcaatttcacct
tcctcccacaattcacctgctgccggatatgacgtagttacgtcatcagcgggaccacga
ggcactgaagaagggaccacgccgtcagcagaagccgcagaaaaagccgaggagccgaat
tcggagtcgacttacaacaacaataacaacaataacaacaacaacaacgaaggtttgctt
cctgacaaaccatcaactggcaacaaccgcaaatcgatcgctgttaaattggaagccaac
ctcgacgattccgccaacaacggtaccgaagacggcacgagtagcgttacgacgccccca
cccgacgcagaagattcttggcaaagccttcaacgtctttacagtttccactgtaaaccc
gacagcaaagtggagtcagacggcgattcaaatgaaacgaggaaaaatgcaattaatgag
ataagaaacaaagctcttggagaactaagaagcagttctctaagtccatcagtgattagt
agcatatcaaatgcagcatcaataaaatcagcattggattcaatcccaagacttgataat
gctgtttctatggtccctcgtctgaccggtctcacagttcaaaatgcgatcttacaaaga
cagaagcaaattatggaacaacaacaacagcaaagggaaggagaaaaactggtagcggaa
cttccagttgtgcccccaagtggccagtatatgagtgtacgacgaagaactttacagtca
aacgtaccaaagccacaccagtgccaaatttgcgggtcaagatttacaagattccacaac
ttaaagcagcatattaagcttcactctggtatcaaaccatacgaatgcgacgagtgtgga
aaacgatttacaaggaactacacattaaggttgcacaaaatgaagcatgttggaatccgt
aacttcagatgcggtacatgcgatgccagcttcacaagccttggtgaattcagagctcac
ttgcgtatcaccatgcattcccatatgcctatcaatgggttaaatgggaattcacccagc
ttaatggaacccgaagatctgagttcggccccagcaccacaaggggttagcaagttcaac
cattttgacgctgctctgcttcgttacggggttgggtcccctggtagtagtgggggcggg
gctgcaggcgaggggtcaactggaaccatctcgcccctggggcatggggctatgattcct
gggacaggggaatccccagaaaggagcgatcgctctttaagcggctcgcctgaggattta
tctaccaagagacctctgtctgatattgaagacaaacatcatgaatcagttgaaacaatc
gctgaatattctgaccatgattccacaacacaagaatccaatctcgattctccaaaacgt
cgcaaactttccgggattcccctgtaccaggaatcctcacaaacagaaaacgacgaagat
gagccaatgtcgctcgtgatcgacacttcacgggattga
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