Ciona intestinalis (yellow sea squirt): 100175004
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Entry
100175004 CDS
T01056
Name
(RefSeq) sphingosine 1-phosphate receptor 4
KO
K04293
sphingosine 1-phosphate receptor 4
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04068
FoxO signaling pathway
cin04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
100175004
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100175004
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cin04030
]
100175004
G protein-coupled receptors [BR:
cin04030
]
Rhodopsin family
Lipid
Sphingolipid
100175004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6020
Motif
Other DBs
NCBI-GeneID:
100175004
NCBI-ProteinID:
XP_026690260
LinkDB
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Position
5:complement(4831800..4833468)
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AA seq
377 aa
AA seq
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MSAKQTRLFPDVLSGNSINVSTLPFAENESCVPLKEPFIHAVSAVPALVVIENLVILLAL
VLYRSRLKHSNVYRYVASTLVANLVTSALGFYHFINYYYGIESAHPNHWWAFRKGMTLAL
SLVLCGNIGLMIYGIEDSTYIVGRVSMQTSEQSTRLDPKFRRRKANALICVVWALPTIYG
LLAMTDWNCTNLCSCTLSYKSGKYLCPVGRCSHIYTPMSKSYLLVVVILWALECIGLLFL
LCRSFCNIRGRGDGSESGGRKISIRKALGKYHASHHTVTILFILFVVCTAPIMGLFFADF
IQQDAHFSHFLVNCITPLPLVYCVVSPILITQKLSGVRSALLMVMTFSWLKPQSNTGPKN
GEKKTPQTPDSTNPTTH
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccaagcagacgcgcttgtttcccgatgtgctcagcggaaattcgatcaacgtt
tctaccttaccgtttgctgagaacgaatcgtgcgtgcctttaaaagagccgtttatacac
gcagtatccgcagtgccggctttggtggtgattgaaaaccttgtcatactacttgctctg
gtcttgtacagaagccgactcaagcacagtaatgtttaccgttatgtggcgagcaccttg
gttgctaatttggtcaccagcgcccttggcttttatcactttatcaactactattatgga
atcgagtcagctcacccgaatcattggtgggcctttcgaaaaggtatgacgcttgccttg
tctcttgtgttgtgcggcaacattggcttaatgatatacggcatcgaagacagtacatac
attgttggcagagtttcaatgcagacctcagaacagtcaacaagattggacccaaaattc
cgaaggcgaaaggccaacgcgttaatatgcgttgtctgggctctgcctaccatatatggc
ctgttggcgatgactgattggaattgtacgaatttatgcagttgcacgttgagttacaag
tcaggaaaatatctctgccccgtcggaaggtgttcacatatctatactccaatgtcaaag
agctatcttttagttgttgtgatcttatgggctctggaatgcattgggcttcttttccta
ctttgtagatcattctgcaacatccggggaagaggagacgggagcgagagcggaggtcga
aagatcagcatccgaaaagcgctcggaaagtaccatgcatcacatcacactgtcaccatt
ctattcatcctcttcgtagtctgcactgcgccaatcatgggtctttttttcgctgatttt
atccaacaagatgctcatttcagtcactttcttgttaactgcatcacaccgcttcccctg
gtatactgtgttgtgagtcctatccttatcacacagaaattatctggagttcgatccgca
cttctcatggtaatgactttctcgtggcttaagccacaaagtaacactgggccaaagaat
ggggagaaaaagacgccccaaacccctgacagcaccaatcctactacgcattag
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