Ciona intestinalis (yellow sea squirt): 100175010
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Entry
100175010 CDS
T01056
Name
(RefSeq) cytoskeleton-associated protein 5-like
KO
K16803
cytoskeleton-associated protein 5
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cin03036
]
100175010
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cin04812
]
100175010
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100175010
Cytoskeleton proteins [BR:
cin04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
XMAP215
100175010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XMAP215_CLASP_TOG
CLASP_N
CEP104-like_TOG
HEAT
HEAT_EF3_N
TOR1L1_N
Cnd1
IFRD
HEAT_ATR
Motif
Other DBs
NCBI-GeneID:
100175010
NCBI-ProteinID:
XP_018670649
Ensembl:
ENSCING00000007598
LinkDB
All DBs
Position
Unknown
AA seq
1660 aa
AA seq
DB search
MLVTISIKCIGALANGLRKKFQSYAHVCIEGMLERFKEKKPNVVAALQEAIDAVFATTNL
AAILETIIEFLAHKNPAIRAQTGLFLSRALLKTKSSVLNKATIKTIVAPLLKNIEHSAPD
VRDGAFLSFGAILKVAGESKLLPFLADLDKLKMEKITECAGKLDGGKPSTSAGASKPAAP
VKKEPEAPTRPKSAAPKSAAAKPKADGTKKVVKGGKKPASQSAKSAASVEPAVEQELGDA
AVDDLIASVITDEERAQILNNNWKERLAGLQSMFSKIKGLDRSSLPCQAIVKLLSMKPGL
KDNNFNCLNEKFNILVHLAQNGKFSRTSAGVCLTATIDKVGDVKCGVGAKATLTAVSEAV
GFGWTLEEVLAHAMSQKNPKIQSESISWVAKSIIEFGITGLNIKMLIEKSKVAFTATNPA
VRAAALSLVGSLAMFIGGKLHMLFENEKPALLQQIDAEIEKVKGQSPPAPTRGVKKKSGS
ADVGEQSDEDVEEAGITMDDLVTRVDISGKITDALISQMADKNWKERKEALESVIEILNE
AKFVTSDIGDLATGLKARLTDSNKILLTTTLNILTQLATALGPHSAKHLQILSANIINTL
ADSKPQVRQAALKCMNTWLENTKLSMWLEGDMISSALSVAKHTFLRIELLTWLAEKLLSV
AKLPSSAKEGLEMCVPVIYSCCEDRSGEVRAKAQGFLPAIMRHISYDKMIKGTGKLTATS
KPTIITLLEKAREQIPAPTKVSKPAPSVSPPSASEVKMEVKSEEPATKPPAAKEKKGLVK
KSKPAPVSKKAQPEEDTTPLFISLPNGKEQRMKDEIKLKTIKWNFTAPREELIVQLQTQL
STCVSPALITEMFHLDFQHHLKAIVMLNQALDKNFENTMQCLDLLLRWLTLRFYDKNTTV
HIKTLEYIKSLFDKLIEGNYRMPEYEVSAFLPHLIIKIGESKDNIRKAVHGIIKQLSLIY
PASKLFTHIMDGTKSKNSRQRSECLDEIALFIETHGVNVCQPSLPKALKEVATNIGDRDK
SVRSSALNAIVAAYNVCGDVVFKHVGRLNEKDMSMLEERVKRSGKYGETPAAPPPEAPAR
KTTKEGRSASTNNERQQQQQQQAAPPSHTIQESMHDLHSSGNTMQTDPMKIPSVARLLSQ
IKPVDFNVVLEPLPEFVNLKSRIPGLSNIAGSSQASSTVDAVISQVASPNIDTAINAMHE
LYQLLKHKDKFPLLAGKIDQVLMSATTQLRMMIDRYLPIITSNEQLVGEEHSNLTEQSFL
SLCKSHISLITEIFEQDTLASQASTYILFDLFRFILQLLLSDQLPNLTSADRLLQVLNIL
VLRMIDHSDPTSIICAVVHVLTDSMETATPKYIELVVKCLWKLGRLISKFLHPEKQKEAF
QHKPLKVAAVVAELDKYWSTYPKDHPIYEKNENKTSIRSVKTLLVILCRELGVKIMDELY
MIPNPESSEVVQIIRKASGAGNMKIPNRPNSSSSSEQKENIREQGLSPDAQLSIIFKKVS
DRKQTKQGLQELYDFKVTNPHYDLESRINSLDIDIFQQYIRRNLKRIESEKQTKSGAFTE
SQKSNYQPPTVQESWDRLNYLRERCGLKPRCTSEKQNGEKTTTDVNHPEPSGESSTVKAD
EAAVRSSGFQSQPKERSISSSANISDLKRRLAQIKQSSSR
NT seq
4983 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtaaccatctcaatcaaatgcattggagctttagccaatggattgcgcaagaaa
ttccaatcttatgctcacgtatgcatagaaggaatgcttgaaaggttcaaggagaagaaa
ccaaatgttgtggccgctctacaagaagctattgatgcggtttttgccacgaccaacctg
gcagccatcttggaaactataattgagtttctggctcacaagaaccctgcaatacgagct
caaaccggtttattcctgtctagggcgcttcttaaaaccaaatcatctgtgctgaacaaa
gctactattaaaacaattgtggctcctctgttaaagaacatcgaacacagcgctcctgat
gttagagacggtgcatttctatcttttggtgcgatccttaaggtggcaggagaaagcaaa
cttcttccatttcttgccgaccttgataaattgaagatggaaaagattacagaatgtgct
ggtaaattagatggtggaaaaccatccaccagtgctggcgcatccaaaccagcagcacct
gtcaaaaaagaaccagaagcacctactagaccaaaatctgctgcaccaaaatccgcagca
gcaaagccaaaagctgacgggacgaagaaagtcgtgaaaggaggaaagaaacctgcatca
caatctgctaagtcggcagcgagcgtggagccggcagtggagcaggagcttggtgatgca
gctgtggatgatcttatcgcttccgtgatcacagatgaggagagagctcagatattgaat
aataattggaaggagagactcgctgggctgcaatccatgttctcgaaaatcaaaggatta
gatcgtagctcgcttccatgccaagccattgtaaagttgctcagcatgaaaccaggtctt
aaagataataactttaactgtttgaatgaaaaatttaacattcttgtacatctggctcaa
aatggaaagtttagcagaacatccgctggtgtatgcttgactgccaccattgataaggtt
ggagatgtaaagtgtggggttggtgcaaaagctactttaactgctgtgagtgaagctgtg
ggatttggttggactttagaagaggttttagcgcacgctatgtcacagaaaaacccgaaa
attcaaagtgaatcaatatcatgggttgccaagtctattattgagtttggaataactggt
ttaaacataaagatgttgatagaaaaatcaaaagtagcgttcactgcaacaaaccctgcc
gtgagagctgctgctctgtcactagttggcagtcttgcaatgttcatcggggggaaatta
catatgttgtttgagaatgagaaaccagcgctcttgcaacaaattgatgctgaaattgaa
aaagtcaaaggtcagagccctccagcgcccactcgtggtgtaaagaagaagtcaggatcg
gcggatgttggagagcaatctgatgaagatgttgaagaggcgggaataactatggatgat
cttgtcactcgggtggatattagtggcaaaattacagatgcgctcatttcacaaatggct
gataaaaattggaaagaacgaaaagaagcgcttgagtctgtcatagaaatcttaaacgaa
gcgaaatttgtgacatcagatatcggggaccttgctactgggttgaaagcaagacttaca
gattccaacaaaattttgttgactactacgctgaatatactgacccaacttgcaacagca
ttgggaccacactctgctaaacatctgcaaatactcagtgcaaacataatcaatacacta
gctgatagcaagccccaagttagacaagcagcgttgaaatgcatgaacacgtggcttgag
aacaccaagttatcgatgtggttggaaggtgacatgataagttcagctttatctgttgct
aaacataccttcctaagaattgagttgttgacctggcttgctgaaaagttgctctccgtt
gctaaactgccctctagtgccaaggaagggttggagatgtgcgtccccgtcatctactcg
tgttgtgaggatcggagtggggaggtgagagccaaggctcaaggattcctccctgctatc
atgagacatatatcatatgataaaatgatcaaaggaaccggaaaactaacggcgacatcg
aaaccaacaataataacgttgcttgagaaagcacgagaacaaattccggctccaaccaaa
gtttcaaaacctgctccctctgtatcgccacctagtgcatcagaggtgaaaatggaggta
aagtctgaagaacccgcgacaaaacctcctgcagcaaaggaaaagaagggattggtgaaa
aaatccaaacctgcccctgtgtcaaagaaagcgcaaccggaagaagacacgactccttta
ttcatctcgcttcctaacgggaaggagcaacgaatgaaagatgaaattaaattaaagacc
attaaatggaactttaccgctccacgtgaagaacttatcgttcagctacaaacacaacta
tctacttgtgtcagccctgcccttattactgagatgtttcatctggacttccaacatcat
ttaaaagccattgtgatgctgaaccaggcattggacaagaactttgaaaacaccatgcaa
tgtcttgacctcctactacgttggctcacgctcagattttatgacaaaaacacaacagtt
cacatcaaaacattggaatatatcaagtcgttgtttgataaactgattgagggaaattat
cgaatgccagagtatgaggtgtcggcatttttaccacatcttattataaagattggtgag
agtaaagacaacatacgcaaagcagtgcacggcatcatcaaacagttgtcacttatctac
cctgcaagtaaactcttcacgcatatcatggatggaactaaatcgaagaattcacgacaa
cgttcagaatgtttggatgagatagctttgttcattgaaactcatggagtgaatgtttgt
caaccatcacttcccaaagcattgaaagaagttgctactaatattggtgaccgggacaag
tcagttcggtcatctgcattaaatgcgattgtcgccgcatacaatgtttgtggggatgtt
gtatttaaacatgtgggcaggttaaacgagaaagacatgagtatgttggaagaaagggtg
aaaagatctggaaaatatggggaaacccccgctgctccaccaccggaggcccccgctagg
aaaacaacaaaagaaggaaggtctgcgtcaacaaacaacgaacgacaacaacaacaacaa
caacaagcagcaccaccctcccatacgattcaagagtcgatgcacgatcttcactcctcc
ggaaacacgatgcagacggatcccatgaagataccgtcagttgcccgtctcctctcacag
atcaaaccagttgatttcaatgttgtgttggaacctttgccggagtttgtgaatttaaaa
agcagaattcctggcctcagcaatattgcgggttcttcgcaagccagctcgacagtggac
gcggttatttctcaagtagcaagccctaatattgacactgctattaatgcaatgcacgag
ttataccagttgctcaaacacaaggataagttcccgttattggcgggaaaaattgaccaa
gttctcatgtctgccaccacacaacttcgtatgatgattgacagatacctcccaattata
acttctaatgaacaattagttggtgaagaacattcaaacttaactgaacaaagtttttta
tctctttgtaaaagtcacatctctctaattactgagatattcgagcaggacacgcttgcc
tcgcaagcatccacgtacatcctcttcgatctcttccgtttcatccttcagctcctcctc
agtgatcagctcccaaacttaacatccgcggatcgtctcctacaagtcctcaacatcctc
gtgttacggatgatcgaccacagcgatccaacctccataatatgtgctgtggtgcatgtg
cttactgacagtatggagacagcgaccccgaaatatattgaacttgtggtgaagtgctta
tggaaacttggaaggcttatttcaaagtttttacatccagagaaacagaaagaagctttt
caacataaacctttgaaggtggcagcagtggttgcagagttggacaaatattggtcaact
tatcccaaggatcatcctatttatgaaaaaaatgaaaataaaacttcgattcggtcggtt
aagacattgctggtgattctgtgtagagagctgggtgtgaagataatggatgaactttac
atgatccctaatcccgaatcctctgaggttgttcaaatcatccgaaaagcatccggagca
ggaaacatgaagatccccaaccgaccaaattcctcttcatcttcggagcagaaggagaac
atccgggagcagggactttcccctgatgcgcaactctcgattatctttaaaaaagtcagc
gatcgaaaacaaaccaaacagggtttgcaggaattgtacgatttcaaagtcaccaaccca
cattatgatctcgaatcacgaataaattcgctcgacattgatattttccaacaatatatt
cgacgaaacctcaaacgaatagaaagtgaaaaacaaaccaaaagtggagctttcacagaa
tcccagaaaagtaattaccagccacctactgtgcaggaatcatgggacagattaaattat
cttcgtgaacgctgtggtttaaaaccacgctgcacatccgagaagcaaaatggtgaaaaa
accaccacagatgtcaaccatcccgaaccatctggtgaatcatccacggtcaaggccgat
gaagcggctgttcgatccagcggctttcaatcgcaaccgaaagaacgcagcattagttct
tcagcaaatatatccgatttaaaacgacgacttgcacagatcaaacaaagttcaagtcga
taa
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integrated database retrieval system
