Ciona intestinalis (yellow sea squirt): 100175040
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Entry
100175040 CDS
T01056
Name
(RefSeq) inward rectifier potassium channel irk-1 isoform X2
KO
K04999
potassium inwardly-rectifying channel subfamily J member 5
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cin04040
]
100175040
Ion channels [BR:
cin04040
]
Voltage-gated cation channels
Potassium channel, inwardly-rectifying (Kir)
100175040
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
IRK_C
IRK
Ion_trans
Motif
Other DBs
NCBI-GeneID:
100175040
NCBI-ProteinID:
XP_002122831
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Position
11:complement(1710776..1727205)
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AA seq
670 aa
AA seq
DB search
MSITEPAEDSTEQTKNRISDKDATKKNETTVQYKQSDSREGSINFAKNDGGPELLFPRDI
QLSVIEEATCKPLKSIHPQNGLNQRENTQNVDALKPVYTLKQVNQNNSGEANQHRRAKIQ
RDFCNSPNSCYGRIYPSLSKFKTGDSDLKPLLPEKLRRTHQNIPYDLGNKISATSPQINQ
GGTINTYSTKTFQRPMKKRRQTRFVTKKGHCNVRHGNVKDRLRYFADLFTSIVDLKWRYN
VAIFVATYTFTWLVFAFLWWFVSFLRGDFDKMNSDEVCVIGIDSFMSAFLFSIETQVTIG
YGTRAITDVCPEAIILLIVQSIFGSIVDAFMVGCMFVKISQPNKRAETLMFSEKSVISLR
DGKMCLMFRVGDLRNSHIVEAQIRAKLIKSRQTQEGEFMALDQTDLDVGYTTGADRLFLV
TPLIICHVIDEKSPFWNMSQSDLKEEEFEIVVILEGMVEATGMTCQARSSYVEDEVMWGQ
RFMPVLMLEKGFYDVNYSNFHDHFEVDTPDISAKEQQLMKQLPQEGGKENSCEQLVRTRP
MIVQSSRSLKLVPREPTVLETSNSFLSASNSSQRVDRLSDNWEEKNEDSALVSQNQNNNN
LPHYVQTSPTNGRTSTQTKLGISRHRAYDKSPTKESLLSNSNEPLSSRRKPQMNIPNGVF
HDYVIDDLEF
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtctattactgaaccagcagaagattcaactgaacaaacgaaaaacagaattagcgac
aaagatgccacaaagaaaaatgaaacaaccgttcaatataagcaaagcgattcgagagaa
ggatcaataaacttcgcaaaaaacgacggaggtccagagcttctatttccgagagacatc
cagttgtcagtcatcgaggaagcaacgtgtaaacctttaaaaagtatccacccacaaaac
ggattaaaccaaagggaaaatactcagaacgtcgacgcacttaagccagtttatacatta
aaacaagtcaatcaaaacaatagcggagaagccaaccagcatagaagggcaaaaattcaa
cgagatttctgtaactctcccaactcttgctacggtcggatttatccaagtctttccaag
ttcaaaactggcgactcggatttaaagcccctgcttccggaaaagcttcgtcgaacgcat
caaaatataccatacgaccttggaaataaaatatctgctacttctccccaaatcaatcaa
ggggggaccattaacacatattctaccaaaacgtttcagaggccgatgaagaagagacga
caaaccaggtttgtcacaaagaagggtcactgcaatgtacgacatggtaacgttaaagac
agactacgatatttcgccgatttatttacgtcaattgttgacctcaaatggagatataac
gttgcaatatttgtcgccacatacacttttacttggcttgttttcgcttttctatggtgg
tttgtgtctttcctcaggggagactttgacaagatgaactctgacgaagtgtgcgtaatc
ggcattgattcttttatgtcagcctttcttttctccattgaaacccaggtaactatcggg
tatgggacaagagcaatcacagatgtttgtccagaagcgattatcttgttaatagtgcaa
agtatatttggttcaatcgttgatgcattcatggttggatgtatgttcgttaaaatttcc
caaccaaacaaacgtgcagaaacattaatgtttagcgaaaaatctgtcatttcattgagg
gatggaaaaatgtgtcttatgtttagggtcggagacctaagaaactctcatattgtcgaa
gctcaaattcgcgcaaagttaataaaatctcgtcaaacgcaagaaggcgaattcatggct
cttgatcaaacggatctagacgtcggttacaccactggtgctgatcgacttttcttggtg
acgcctttgatcatttgtcatgtgattgacgaaaagtcaccgttttggaacatgtcccaa
tctgatctgaaagaggaagaatttgaaattgtggttatattggaaggcatggtggaagca
acaggaatgacttgccaagctcgaagctcctatgtggaggatgaagtaatgtggggtcaa
cgctttatgccagtactaatgttggaaaaaggtttttatgatgttaattattctaatttt
cacgatcactttgaagttgacactcctgacattagtgcaaaagaacaacaattaatgaaa
caactgccacaagagggtgggaaagagaactcttgtgaacagttggttcgtacacgaccg
atgattgttcaatcttctcgaagcttgaaacttgttccaagggaacctaccgtactggaa
accagtaactcatttttgtctgcgagtaactcgtctcaaagagtagatcgcctcagtgac
aactgggaagaaaaaaatgaagactcggcactcgttagccaaaaccaaaataataataac
ttgccacattatgttcaaacgagcccaaccaatggcaggacaagtactcagacaaaactt
ggtatatctcgacaccgagcatacgacaagagtcctactaaagaatcgttgcttagcaac
agtaacgaaccgttgtcatcaaggcggaaaccgcaaatgaatattccgaacggtgtattc
catgattatgtaatagatgatctagagttctaa
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