Ciona intestinalis (yellow sea squirt): 100175119 Help Entry 100175119         CDS       T01056                                  Name (RefSeq) poly [ADP-ribose] polymerase 4   KO K10798   protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-] Organism cin  Ciona intestinalis (yellow sea squirt) Pathway cin03410   Base excision repair Brite KEGG Orthology (KO) [BR:cin00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     100175119  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:cin03400]     100175119 DNA repair and recombination proteins [BR:cin03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Other BER factors      100175119 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  VIT PARP BRCT_2 VIT_2 VWA_3 BRCT PTCB-BRCT VWA_2 RTT107_BRCT_5 Motif Other DBs NCBI-GeneID:  100175119 NCBI-ProteinID:  XP_009858893 LinkDB All DBs Position 6:2221678..2243118 Genome browser AA seq 2278 aa AA seqDB search MTIIMHKKCVTAKNDVFKHRLFVLETGTSSYKYKQDLRSKITKNGGTISYLLTKKSHYVV SQPNTDTYKTQRALKLGIPVVSSSYIDACIHDNTLLDTDDYALNGATKSKSFKKGKIKIM GWRNDPVTKLAKPACNIPTKFKSESKKCPKFTEYFRVAKFFILQGTKSDKNKQPQTCLCV YELHIADSGDTIHVDSEAKYRVTEHWCDWDQGSTHGTESFEYFFDSCADALVSMQALVTS ASKTYSMKHLDKMPVDKLGSFKLRQLLDEMGATGGTLHPQVAQFISELFALVFNNLNFDP RSLSPDQLTKAVVALVKIHEDLLVGKSTEELSSELYSMLPWSGDKPVICNMKLLSNMQDT VQLMKDSILMVETFNSNLESWDDKTDIHDHEVASFYRALKCAIWWMDPDEAEHQEMMKLL HQSKSLPNGFKVVNIFRVHREIEDENFTHNLSEKRLLFHASKPQNFFGILSRGLLPPLVV TSVHGGDRSDEGNLGSGLYFADDVSTSARYSNPNPQTGTRLLLINEVALGRIYESTKRDV SLTAPPNGHDSVKAVGKTENPDSEFSSNEYVVYNTDQQRMRFLVEFVLEGDQVIEKTSIA KEISLKDPETLMKTNLDVEKVSLEDVTQITDPTELLKPGLNIQGSEDQIPLEELHVRSKM IDMVAEVVVLQQYTNTSTATFEAKYVFPLDDSAAVCGFEAFINGKHVIGKVKEKEVAHKE YKEAVAAGHGAYLMDEERADVFTISIGNLPPKAKVVIKITYVAELSMVSNNGLESIQFKL PGSIAPNVRENTLIKGPVTQYAVDRVTVQESAVRKSSLVLSIEMPFSIRKLECTTHKVLI KQTDTKATIRLANNEQLGGGGFNFLVGLAEVHVPRMWVEEDDDGVGGQACMLAFYPEFEV EPVTNYRAIILIDMSQSMKGEGGKLETYSKKISLMILKQLPKNCLVNIVKFGSSYQELFV YEQVLSENVVWEKSVEFIQSCYANMGASEVWRPLTSLSWVNDYEGTDRLSNIFLVSDGQL GEEKRTLDVAAMLGGGRKSRVFTFSLGTTANQYLLKKISRSSGGSHEHFAFDAKSKWERK VSQQLEKAQQPVLTDIKVNWKTYNENEETQVSSALPKQAPEYISSLFNQSRVVVYGFVPH CRQAELSAKICGKEISTVVSVSELSVTKGKTLHHLTSRALIRDYEDGLHHLSPLERAEAK KLRKPHIIEMSVKHSVVSPYTSFVAVEERKKDEVISKGPSITELLDEFTDDLIPEIGWES EDQDMPAENIEELLKSAETAYYRSVRESVRIFEAAEEMAYCEDKPVYWQAQIITTMLKLG LDVKISVDFLEELRLYMQELEREEEGKGKDLVYSTLLHNVPGFDQSIDLYTKIDIARCLL YAEGDLPEDTGNSIEVVQRLMLEHLDETYPRHIGVFGTEGNESGPSDIFADTGADAFQDE TAVYLEADSESSESDHVSEYMGANICDDVYGEDTYDNIMWGGTSTDDSVDNSSSSDVDSN LSDGSLVIHSSLDSTNRTVLRGGGGPGEVLSDEETSDNCDSSGESSASYNEKRRRSFEAM ISDPNRTVLRGGGGKSSESYSDSFNSPGERTSTLLQAKVLNLKELRVLTGDGPGPMPTNK RTTETDGLSAQSSGFCGQSFGSGEPVIRLAKGKALQHLVSNRLQVARRLRHESRERDMPE RRSFDGRHVSSSAKPQVSGMGLQRGPGPVGGKTTKPMATDQKAPEEDFGLYGISFSDDDE SQNRLLSAEISVPIRRSVLARGGTVPMSSAQEKSKDFDGYEDRPTGVTRQLHLLRSGSSG VSGANKIPTQVSAGQEDLSTRASVFGLSATGVAFGSSKPTPPKVFPPKAPFSFGSQAPKS LGSLFTAQSGAPVAFGAQPITGLFGSSTQEKPTGLDAPGFSFNIGADKVPIPASKASFAS AFGQPRQQQQQQQSLTTPDSPRVQTAIRASPAMPHHPGFRFKLQSNKHEGSSDFPQIQSE SSDKGFAQTSAVTIEDKQQQQQKLLQPPQQLQQIQQQPQQQEQQPQKKIQLQQQQQQPDF ASFQSLQPPHSQQQLTCVSVRRRPMHPSTKKKSLTPLPPSLSTLPPPPQAARTTESNPPK EITQEFENLHGFAKFVFMANQEDFTKIRLIKRARNVMKDKHFELSKEVLEDDIQPYPLYM VMEGWLVEAGVRSLGKRIYSMVLKMLFTAFVNGILEELLQSDPVVTADSKLLEDAKLWLK QTDSKYPGLYARLELGASWPKAAENFVNKLMDKIAEDPRLNVEKMLQVFGYTYDPDLN NT seq 6837 nt NT seq  +upstreamnt  +downstreamnt atgacgataattatgcacaaaaagtgcgttactgcgaaaaatgacgttttcaaacaccgt ttatttgttttggaaaccggtacttcttcttacaagtataaacaggatttaagaagcaaa atcacgaaaaatggcggcaccatttcatacctgcttaccaaaaagagccattatgtggtt tcccaaccgaacacggatacttacaaaacacaaagagccttaaagcttggaattccagtt gtatcatcaagttatattgacgcatgtatccatgataatacgttgttggacacagatgat tatgctttgaatggcgcgactaaatcaaaaagttttaaaaaaggaaaaattaaaattatg ggatggcgaaatgatcctgtcacaaaattagcgaaacctgcttgcaacataccaaccaag tttaaaagtgaaagcaagaaatgcccaaagtttacggagtatttcagggttgccaagttt ttcattttacaaggcacaaagtcggacaaaaacaagcaaccccaaacctgcctatgcgtg tatgaactacatattgctgacagtggtgatacaatacatgttgatagtgaagcaaaatac agagtaactgaacattggtgtgactgggaccaggggtctacacatggaacagaatctttt gaatatttctttgacagttgtgcagatgcactggtctcaatgcaagcattggtgacctca gcaagcaaaacttattccatgaaacaccttgataaaatgcctgtagataaactgggatcc ttcaagctgagacagctgcttgacgaaatgggggccacagggggaacccttcaccctcaa gttgcacaattcatatcagagttatttgcgctggtttttaacaatttaaacttcgaccca agaagtttaagtcccgatcagttaacaaaagctgtcgttgctcttgttaaaattcatgaa gatttgttggttgggaaaagcacagaagaattatccagtgaactttactcaatgctgccc tggtcgggggataaacctgtcatttgtaatatgaaactgttgtccaatatgcaggacact gtacagctaatgaaagacagcattctgatggttgagacattcaactccaaccttgagagt tgggatgataagactgacatccatgatcatgaggtcgcttctttctatcgagcgctcaag tgcgctatctggtggatggatccagacgaggcagaacatcaagaaatgatgaaactgctt caccagtcaaagagtttaccaaatggtttcaaagttgtgaatatatttcgtgtacatcgt gaaatagaggacgaaaactttactcacaatttaagtgaaaagaggcttctgtttcatgct tctaaaccccagaatttttttggaatcttgtctcgaggtctcttgccccctttagtggtg acgagtgtacacgggggagatagaagcgacgaagggaatcttgggagtggactttatttt gctgatgatgtcagcacaagtgctcgatattcgaacccgaacccccaaaccggaacccga cttcttctgatcaacgaggtcgctcttggtcgcatatacgagtcaaccaagcgtgacgta tcgttaacggcacctcctaatggccacgacagcgtgaaagccgttggaaaaactgaaaac ccggattccgagttcagttcaaatgagtatgtggtttataacactgaccaacaacgaatg cgttttctggttgaatttgtattggaaggcgaccaagttattgaaaaaacttcgatagcg aaagaaatttcactgaaagatccggaaaccttaatgaagacgaatttggatgtggaaaaa gtatctttagaagatgtgacacaaattaccgacccaacggagttactgaaacctggtctt aacatccaagggtcagaggatcaaatcccactggaggaacttcatgttcgatctaagatg attgacatggtagcagaggttgtagtcctgcagcaatacaccaacacttccactgcaaca tttgaagctaaatatgttttccctttggatgattcggcagcagtttgcgggtttgaagca tttattaacgggaaacatgtaattggaaaggtaaaagagaaagaagtcgcccataaggaa tacaaggaagctgtggcagctggacatggagcttatttaatggatgaagaaagagctgat gtattcaccatcagtattggcaaccttcccccgaaagctaaagttgtgataaagataact tatgtggctgagttgtctatggtgtctaacaatggtcttgagagcatccagtttaagctg cctggatccatagcacctaatgtgcgtgaaaacaccctgataaaaggacctgtgacgcag tatgcagtggacagggtaacagtacaggagtctgctgtaaggaaatcttctctagtcttg tccatagaaatgccattcagtattcgtaaacttgagtgcacgacccacaaagttttaatc aagcaaaccgatacaaaggcgacgatacgtttggccaacaacgagcagttgggtgggggt gggttcaacttcctggtcgggttggctgaggttcacgtgccccgtatgtgggtggaggag gatgatgatggggtggggggtcaggcttgcatgcttgccttctaccctgagtttgaagta gaacctgtcaccaactacagagccataattctaatagatatgtcgcaatctatgaaagga gagggtgggaaactggaaacttattcaaagaagatatcactcatgatattgaagcaactg cccaagaactgcttggttaatattgtaaagtttggatcatcatatcaagagttgtttgta tatgaacaagtgttgagtgaaaatgtggtttgggagaaatcggtggaatttattcagtct tgctatgcaaacatgggagcttcagaagtttggcgacctttgacctcactgtcatgggtc aacgattacgaaggcactgacagattatcgaatatattcttggtaagcgacggacaactg ggtgaagagaaacgaacattagatgtcgctgctatgttggggggtgggcgcaagagtcgc gtgttcacttttagcttgggcaccacagcaaaccagtatctactaaagaagatatcccga tcatcaggtggttcgcatgaacatttcgcattcgatgctaaatccaaatgggaacgaaag gtctcacagcagttagagaaagctcaacagccagtgttgaccgatataaaagtgaattgg aaaacatataatgagaatgaggagactcaggtgtcatctgctttacccaagcaagcaccg gaatatataagttcactattcaaccaatcaagagttgtcgtgtacgggtttgtacctcac tgtaggcaggcagaattgtcggccaaaatttgtggtaaagaaatttctacagttgtgtct gttagtgaactgagtgttactaaaggcaagaccctgcaccatcttacctcacgtgcgctg atccgagactatgaagacgggttgcatcatttatcaccactagagcgcgctgaagcaaag aaattacgaaaacctcatattatagaaatgagtgtaaagcattcagttgtctctccttat acttcatttgtggctgtggaagaaagaaaaaaggatgaagtgataagcaaaggacccagc atcactgaactcctggatgaattcacggacgatctcattccagagattggatgggagagt gaagatcaggacatgcccgcagagaacatagaagaacttctaaaatcagcagagacagct tactacagatctgtaagagaatctgtgcgtatatttgaagcagctgaggaaatggcatat tgtgaagataaacctgtttactggcaagcacaaatcataacaactatgttgaagctggga ctagatgttaaaatatctgttgactttttggaagagctacgcttatacatgcaagaactt gagcgtgaagaagaagggaaaggaaaagatctcgtttactccacactactacacaatgtt cctgggtttgaccaatctatagacctttacaccaagattgacattgcaagatgtttgttg tatgctgagggtgacttaccggaggatactggaaactctattgaggttgtacaacgcttg atgttagaacatttagatgagacatatccaaggcatataggagtatttggaactgaggga aatgaaagtggaccatcagatatatttgctgatactggtgcagatgccttccaagatgaa actgcagtgtatttggaggcagattctgaaagtagtgaaagcgaccatgtatcggaatat atgggagcaaacatatgtgatgatgtgtatggtgaagacacgtatgataatataatgtgg ggtggaacttctactgatgattcagttgataactcctcaagttcggatgtagattcaaat ttatccgatggtagtttggtgatacatagttcattggattcaacaaatcgcactgtttta cgtgggggtggtggtcctggagaagtacttagtgatgaagaaacatcagataactgtgat tcttctggtgaatcttctgcttcctataatgaaaaacggagacgttcatttgaagcaatg atttcagacccaaatcgcactgttttacgtgggggtggtggaaaaagtagtgaatcttat agcgattcttttaattctcctggagaaagaacgagtaccttattacaagccaaggtttta aatctaaaagagcttcgtgttttaactggtgatggccctggaccaatgcctacaaacaaa agaacaacagaaactgatggtttgtctgcacaatcttctggtttttgtggtcaatccttt ggctctggcgaaccagttataagattagcaaaaggtaaagctttacagcatttggtatcg aacagactccaagtagctaggaggttgcgccacgagtccagggagcgagatatgccagaa agaagaagttttgatggtcgacatgttagttcttctgctaaaccacaagtatcaggtatg ggtcttcaaaggggtcccggcccagttggtgggaaaactactaaacctatggctacagac caaaaagcaccagaagaagactttggtttatatggtatatctttttctgatgatgatgaa tcacaaaatagattgttatcagctgagatttcagttccaattcggcgttctgtattagct cgcggcggtactgtgccaatgtcaagtgcgcaagaaaaatcaaaagattttgatggttat gaagataggccaactggtgtgacaagacaactacatctgttacgaagtggttcttctggt gtttctggtgcaaacaaaataccaacacaagtttctgctggtcaagaggatttgtctact cgtgcaagcgtatttggtttatctgcaactggtgttgcttttggttcctctaaaccgaca ccaccaaaagtattcccacctaaggcaccatttagttttgggtcacaggcaccaaaatct ctgggttcattgtttactgctcaatctggtgcaccagtagcattcggtgctcaaccaata actggtctttttggttccagcacacaagaaaaaccaacaggtttagatgcgcctggtttc tcatttaatattggcgccgataaagttccaattccagcttcaaaggcaagttttgcaagt gcttttggacaacctaggcaacaacaacaacaacaacagtcactaactacacctgattcc cctagggtccaaacagcaattagagctagccccgccatgccacatcatcctggtttccgt tttaaattacaaagcaacaagcatgagggtagtagtgactttcctcaaatacaatctgaa tcttcggataagggtttcgctcaaaccagtgcagtcacaattgaagataaacaacaacaa caacagaaactactacaacccccacagcagctacaacagatacaacaacaaccacaacaa caggaacaacaaccacagaaaaagatacaactacaacagcaacaacagcaacctgacttt gcaagtttccagagtcttcaaccgccacactcacaacaacaactgacttgtgtcagtgtt agacgaagaccgatgcatccatcaaccaaaaagaagtctttaacccctctacccccctcg ttatctaccctaccacccccaccccaagcagcaaggacaactgagtcaaatcctcctaaa gagatcacacaagagtttgaaaacttgcatggttttgcaaagtttgttttcatggcaaat caggaagattttacaaaaattaggttgattaaacgggcaagaaacgtaatgaaagacaaa cattttgaattatcaaaagaagttttagaggacgatattcaaccttatccattatacatg gtgatggagggttggctggtggaagccggtgtgaggtctcttggtaagcgcatatatagc atggtattgaaaatgctattcacagcatttgtgaacggtatattggaggaacttcttcag tcagaccctgttgttactgctgatagcaaactactggaagacgctaagctatggttaaag caaacagattctaaataccctggtctgtatgctagacttgagttgggtgcaagctggcca aaagctgctgaaaactttgttaataaattaatggataagattgcagaggatccacgatta aatgtggagaaaatgctacaagtatttggttatacctatgatcctgatcttaactaa

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