Ciona intestinalis (yellow sea squirt): 100175141
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Entry
100175141 CDS
T01056
Name
(RefSeq) RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03013
Nucleocytoplasmic transport
cin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100175141
03015 mRNA surveillance pathway
100175141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cin03019
]
100175141
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100175141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
RRM_3
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
100175141
NCBI-ProteinID:
XP_026694250
Ensembl:
ENSCING00000016317
LinkDB
All DBs
Position
Unknown
AA seq
243 aa
AA seq
DB search
MVVSTKENEVDKSNPRTGRQRKGRSSSSSGSSSGSSSSGSSSDGSRSSSSDSSSSSSPEP
GRGRGKQRERKESPPQRRGGPTSRRSRSPRRPIRRERSPTPKPTKLHVGNLTKNINKEHV
NEIFSYYGKVKTVDMPMERNGIPRGLAYVEFDDHTEADKALKFMDGGQIDGQVVAIRAVL
PIRRRPPRRSPPPMMQRGPRGFPPQHAPWRRSPPRRRRPPRSPPRRRSPPRRRRARSSSS
ESR
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggttgtgagcacgaaggaaaacgaagttgataaatcgaatcctcggacagggaggcag
aggaaagggaggtcctcctcaagctccgggagcagcagcggaagttcatcgtcagggagt
tcgtcggatggaagtcgaagttcatcgagcgattcaagctcctcttcgtccccggagccg
gggaggggacgagggaaacaacgagagaggaaggagagtcctccgcagagaagaggagga
ccaacatcacgaagatcgaggtccccacgacgacccattcgaagagaaagaagtccgacc
ccaaagccgacgaaacttcatgttgggaatcttacaaagaatatcaacaaggaacacgtc
aatgagatcttctcatattatggtaaagtaaagacagttgacatgccaatggaacgcaat
gggattccacgcgggttggcgtatgtagagttcgatgatcacaccgaagccgacaaagca
ttgaagttcatggatggcgggcagattgatgggcaggttgtagcgatacgtgccgttcta
ccaatccgtcgtcgccccccacgccgatcacccccacccatgatgcaacgggggccacgg
ggatttcccccacaacatgccccgtggcgccgctcacccccacgaagacgccgaccgcca
cgttcccccccgcgccgcaggtcgccaccgagacgccgtcgtgcacgaagcagctccagc
gaatcaagatga
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integrated database retrieval system
