Ciona intestinalis (yellow sea squirt): 100175359
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Entry
100175359 CDS
T01056
Symbol
nachr
Name
(RefSeq) acetylcholine receptor subunit beta-like precursor
KO
K04813
nicotinic acetylcholine receptor beta-2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04080
Neuroactive ligand-receptor interaction
cin04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100175359 (nachr)
04082 Neuroactive ligand signaling
100175359 (nachr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cin04040
]
100175359 (nachr)
Ion channels [BR:
cin04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
100175359 (nachr)
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Paralog
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF3671
Motif
Other DBs
NCBI-GeneID:
100175359
NCBI-ProteinID:
NP_001265924
Ensembl:
ENSCING00000008787
UniProt:
E7FIZ4
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All DBs
Position
7:complement(4711065..4717763)
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AA seq
499 aa
AA seq
DB search
MINCLLIFLLLPITKTSAAKFESTEGRLANYLLNGYNPQFRPYNKKYENKTFVDVMMTLS
QIISVKEKSQEFTTSVYMQYDWLDDRFGWVPDDYDGITTVRIPCASIWVPRIVLQNSIDG
NFDVSLRTNALIQHDGKVSWLPPALYKSTCTIEVALFPFDWQNCTMVFRSATYDRTEMEF
GIPIDTVYIDLSAFQSNGEWDILQRPVKINSNENDKTYQDITFYFIIRRKPQFYIINLII
PCILMSSLSCFVFYLPSISCEKMTLSISILLGETVFLFLIAQRMPETSLAVPLIAGYLLF
VMILVIISVICSVVVCNVHYRSNTTHSMPDWIVWIFMEKLAPLLKVERPSEEESGACSAR
PRRCSSVSTRKAMKQRSEWKPPSEILFDHQASRLGFRARHYLNEYGMTGINVAAPENGSF
VPPSFKKLPKGFQPAADSIDYIANQKKEENEMGQSQDDWGYVALILDRLLLWVYLATFTL
GTLFFFLQTKFAYYPEKLN
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgattaactgtcttcttatctttcttctacttccaataacaaagacttcagctgcaaag
tttgaatccactgagggacggctggccaactatttactaaatggttacaacccacagttt
cggccatacaacaagaaatatgaaaacaaaacgtttgtggatgtgatgatgacattgtcc
cagatcattagtgtgaaagagaagtcacaagaattcacaacatctgtgtacatgcagtat
gattggttagatgatagattcgggtgggttccagatgattatgatggaataactacagtt
cgtatcccctgtgcatcgatttgggtaccacgtattgtgttacagaatagcattgatggc
aactttgatgtctctttacgaacaaacgcacttattcaacacgatggaaaggtgagttgg
cttccgccagctttgtacaagtcaacgtgtacaattgaggttgcgttgttcccatttgat
tggcaaaactgcacaatggtttttcgttcggctacttacgatcgtacagaaatggaattc
gggatacctatagacaccgtttacatcgatttaagcgcttttcaatcaaacggggaatgg
gacatcctgcaaagaccagtcaaaataaattccaacgaaaatgataaaacctaccaagat
atcacgttttatttcatcatccgaagaaagccccagttttacatcataaacctcattatt
ccatgtattttgatgtcttcgctttcttgtttcgtcttctatctaccttcaatatcatgc
gaaaagatgactttatctatttccattctacttggtgagactgtgttcctcttccttatc
gcacagaggatgccggaaacctccctcgctgttcctctgattgctggttatctcctcttt
gtaatgatcctggtcatcatcagtgtaatatgcagtgtcgtggtgtgtaacgtacattat
cgatcgaacacaacacattcaatgccggactggattgtttggatatttatggagaagtta
gctcccctgctaaaggttgaacgaccttcagaagaagaatctggcgcatgttctgctcga
ccgcggcgatgtagctcagtaagcacaaggaaggcaatgaaacaaaggtcagagtggaaa
cctccaagcgagattctatttgaccatcaggcgagccgtttggggtttcgtgcacggcac
tacttgaatgaatacgggatgactggaatcaatgttgcggcgccggaaaatggaagcttc
gttccgccttcgttcaaaaaactgcctaaaggtttccagccagctgcagactctattgac
tacattgctaatcagaaaaaggaggaaaatgaaatgggacagtcacaagatgactggggc
tacgttgcattgattttggatcgcttgctgctctgggtttaccttgccactttcacactt
gggactttgttctttttcctgcagacaaagttcgcgtattaccctgaaaaattaaattaa
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