Ciona intestinalis (yellow sea squirt): 100175403
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Entry
100175403 CDS
T01056
Name
(RefSeq) 28S ribosomal protein S27, mitochondrial
KO
K17406
small subunit ribosomal protein S27
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
100175403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cin03011
]
100175403
Ribosome [BR:
cin03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
100175403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MRP-S27
PPR_2
PPR_1
Motif
Other DBs
NCBI-GeneID:
100175403
NCBI-ProteinID:
XP_002131841
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All DBs
Position
11:951793..955252
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AA seq
442 aa
AA seq
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MSFFTKLYSNIHFVPRCGTQTQVRKYLSDRYGAIGEISKREQNTDMPVVCLSLDRCHEKN
FPISSLMIDRMVATIDNAEHLHGSQYYLHKFRYSENGYFLRPWTVYTFVDKCLKYDAQIL
MECLKNKQHYGIFPDQVCFNKLLDHFMKKNDLKGGVEVLVEMFLLEMLDNKTCHALSLKL
LSQYWEANVAEGNVVPEFADVVEKRNIAGVLYCVGRFLSNPPIMVMGQALLGQIEAEHGI
RAIYQEPWGPLSWEPGYLDTALNYLETSNSVISEECANTLLHCAGQQGSDCDTLVKVKEV
INNLRERSLISSDETLTLNGAANKLLSCLKVNEEQDMNSFKQTAQDWVKERETLIEIESQ
ILKEYSNERERVFQEMEIDDKAHLMAVERLGFWDLAKSEEADVSDQIFYLRKDYVEGAMY
DLDILERYREICGSTKEPVILI
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtcattttttacaaagctgtattccaatattcactttgtacctagatgtggcacacaa
acacaagtaaggaagtacctgagtgatagatatggtgccattggcgagatttcaaagcga
gagcaaaacactgacatgccagttgtgtgtttatcacttgaccgatgccatgaaaagaat
tttccaatcagctcacttatgattgaccgtatggtggccaccattgataatgctgagcat
ttgcatggctcacaatattacttacataagttcaggtattctgaaaacggttatttttta
cgcccatggacagtttacacttttgtcgataagtgtttaaagtatgacgctcaaattctc
atggaatgtctcaaaaacaaacaacattatggaattttcccagatcaagtctgctttaat
aaattacttgatcattttatgaagaaaaacgacttaaaaggtggggttgaagtccttgtc
gaaatgttccttcttgaaatgctcgataataaaacttgccacgcgttaagtttgaagctc
ctctcacaatactgggaagccaacgttgcagaaggaaatgttgttcctgagtttgcagat
gtggttgaaaagagaaatatcgccggcgtgttgtactgtgttggtcgattcttatccaac
ccacccataatggtgatgggccaagcacttcttggtcaaatcgaggcagaacatggcatt
agggcaatttaccaagaaccatggggtccactgtcttgggaacctggctatttggataca
gctttaaattatctggaaacctcaaattctgttatatccgaagaatgtgcgaatacttta
cttcactgtgcgggtcaacaaggtagtgactgtgatacattagtgaaagttaaagaagtt
ataaacaacttgcgcgaaagaagtttaatatcttctgatgaaactcttacattgaatggt
gctgccaacaagttgttatcttgccttaaagtgaacgaagaacaagatatgaattcattt
aaacaaacagcacaagactgggtgaaagaaagagaaactttaatagaaatagaaagtcaa
atattaaaggaatattctaacgagagagaaagagtttttcaagaaatggaaattgatgat
aaagctcacttgatggcagtagagagactgggtttctgggacttggcaaaaagtgaagaa
gccgatgtttcggaccaaatattttatcttcgtaaagattatgtcgaaggtgctatgtat
gacctggatattttagaacgatatcgagaaatttgtgggtcaactaaagaaccagtgatt
ctcatatag
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