Ciona intestinalis (yellow sea squirt): 100175471
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Entry
100175471 CDS
T01056
Name
(RefSeq) lysosome-associated membrane glycoprotein 1 isoform X2
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03272
Virion - Hepatitis viruses
cin03273
Virion - Lassa virus and SFTS virus
cin04140
Autophagy - animal
cin04142
Lysosome
cin04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
100175471
03272 Virion - Hepatitis viruses
100175471
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100175471
04142 Lysosome
100175471
04140 Autophagy - animal
100175471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100175471
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cin04147
]
100175471
04090 CD molecules [BR:
cin04090
]
100175471
Membrane trafficking [BR:
cin04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
100175471
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
100175471
Other autophagy associated proteins
RNautophagy/DNautophagy
100175471
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
100175471
CD molecules [BR:
cin04090
]
Proteins
100175471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2_2nd
Lamp2-like_luminal
OmpA_membrane
Motif
Other DBs
NCBI-GeneID:
100175471
NCBI-ProteinID:
XP_009861583
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MFNHILFTGTSVICGNASENKTTTASASTVAGSSTSLSSATTPLLSTISFVTLSTTPETI
TTDTTEPTPQATTESNETTTVTVPVTSATVTNVTTGQTSTVGNSSTAVSTTTAPPSTTAA
SPTTGTPLTTAAPSPFPSQNEYTVSENGVICLKVDIKAYFKKGEAVLENVTSLYKVDNSS
SSCSLIDVVYMENEFSMTFKMDTKNSSFYLSYVKANLNGIEANSTQLTVGKVALKASYMC
ASGIEVKMSNNITMVLEYVQFQAFKIDNGKYGIATKCHSDLSSIIPIVVGSVLAGLILVV
ILAYVVGRRRSRTGYEEI
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatcatattttatttacaggaacttcagtcatctgtggaaatgcaagtgaaaat
aaaaccactactgcgagtgcgtcgactgtggctggtagcagcacttccctctcatctgct
accacccccctactttccactatttcctttgtcacattgtctactactcctgaaacaata
acaactgatacaacagagcccaccccacaagcaactactgaatcaaatgaaacaacaaca
gtaacggtacctgtaacatctgctactgttactaatgtaacaactggtcaaacatcaact
gtaggaaactctagtactgctgtatcaacaacaacagcaccaccatcaactactgctgca
tcacctaccactgggacaccacttactactgctgccccaagccctttcccatctcaaaat
gaatacacagtgtctgaaaatggtgtcatttgtttgaaagttgatataaaagcctacttt
aaaaagggcgaagcagtgttagagaatgttacttcattgtacaaagttgacaatagcagt
agctcatgcagcttaattgatgttgtttatatggaaaatgaattttcaatgacctttaaa
atggatacgaaaaattcttctttttacctgagttatgtaaaagcaaacttaaatggaatt
gaagcaaattcaactcaactcacagttggtaaagtggcattgaaagcttcatacatgtgt
gcatcgggtatagaagtgaaaatgagcaataacatcactatggtgttggaatatgtacaa
tttcaagcattcaaaattgacaatggaaaatatggaattgcaacaaagtgccattcggat
ctcagttcaattattccaatagtagttggttcggtgttggcggggttgatacttgtagta
attttggcttatgtcgttggacgacgcagaagtcgaacgggctatgaggaaatctaa
DBGET
integrated database retrieval system
