Ciona intestinalis (yellow sea squirt): 100175472
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Entry
100175472 CDS
T01056
Name
(RefSeq) ubiquilin-1
KO
K04523
ubiquilin
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100175472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100175472
03051 Proteasome [BR:
cin03051
]
100175472
Membrane trafficking [BR:
cin04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
100175472
Proteasome [BR:
cin03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
100175472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
Ubiquitin_5
Rad60-SLD_2
STI1-HOP_DP
UBA_7
UBA_HOIP
Dsc3_N
UBA_NBR1_C
Elf4
Motif
Other DBs
NCBI-GeneID:
100175472
NCBI-ProteinID:
XP_002129159
Ensembl:
ENSCING00000008783
UniProt:
F6SDE2
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All DBs
Position
4:complement(5058516..5063904)
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AA seq
527 aa
AA seq
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MAENTQTTITSEETIKITLKTPKEKQEFTVSPKISVKDLKAEVSKKFNATTEQLVLIFSG
KILKDAETIDHHMIKNGHTVHLVIKSASRAQPTPPPPTTTQASDAPTSQSSNSSLPFNLG
SMGGLSGLGAMGLDSPNFMEMQQQMQREMLSNPEMLQRMMDNPLVQNMMSNPEIIRNMMS
NNPQMQQLMERNPEITHMLNNPQLMRQTMELARNPAMLQEMMRNQDRALSNLESIPGGYN
ALRRMYTDIQEPMLNAAQEQFGQNPFAALNETSNSGASTQNTENTNPLPNPWGSSPQATT
TSTTSSTNRPTTTPSTNTAGSGLFNNPAMQNLMQQITDNPSLMQNMMTAPYMQGMMQNMA
ENPELANQIFSHNPLFANNPEMARMMPQMLQQMQRPEMQNLFTNPRAMQAMMQMQAAMQT
LQQEAPGLMTGLGPTGAAVPPTTTTTTSTPSSTTTTNNPASSQALLNQMMQTLATGPPAA
AALSPETRYRAQLEQLSAMGFVNRDANIQALTATNGNVNAAIEFLLG
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaacacccaaactacaattacctctgaagaaacgattaagataactttaaaa
acgccaaaggaaaagcaagaattcacagtttcacccaaaatatctgtaaaagatttaaaa
gctgaggtgtcaaaaaagttcaacgccacaactgagcagcttgtcttaatattctctggc
aagattttaaaagatgccgaaacgatagaccatcatatgataaagaatggacacactgtt
catcttgtgataaagtcagcatcacgtgcccaaccaacccccccaccccccacaactact
caagcttctgatgcgccaacatctcagtcctccaattcaagtttgccatttaatctcggc
agcatgggtggcttatcagggcttggagcaatggggttagactcacccaacttcatggag
atgcaacaacaaatgcagagagagatgctttccaaccctgagatgttgcaacgaatgatg
gacaacccacttgtacaaaacatgatgtcgaatccagaaataattcgaaatatgatgagt
aataatccacagatgcagcaactgatggagcgcaacccagagatcacacacatgttgaac
aatccacaacttatgagacaaaccatggaacttgcaagaaacccagcaatgctgcaagaa
atgatgagaaatcaggatagggcacttagcaacctggaaagcatccctggaggttataat
gcattgcgtagaatgtacacagacatacaggaaccaatgcttaatgcagcacaggagcag
tttggacagaatccatttgctgctcttaatgaaacttctaatagtggggcgagtactcaa
aacactgaaaacacgaaccccctccctaacccatggggttcctcaccgcaagcaactaca
acatcaacaacttcttcaacaaatagaccaacaacgaccccatcaactaatacagcagga
tcaggtttatttaacaaccctgccatgcaaaacctgatgcaacaaatcactgacaatcca
agtttaatgcaaaacatgatgacggcaccttacatgcagggtatgatgcaaaatatggcg
gaaaatccagagttagcaaaccagatattttcacacaacccattgtttgcaaacaatcct
gagatggcccgtatgatgccacagatgctacagcagatgcaaaggcctgaaatgcaaaat
ctctttaccaaccctcgtgccatgcaggcgatgatgcaaatgcaagcagcaatgcaaacc
ttacagcaagaagcaccagggctcatgactggacttgggccaactggtgcagcagttcca
ccaacgactactacaacaacttcaaccccaagttcgacaactacaaccaacaacccagca
agttcacaagcattgctcaaccaaatgatgcaaacgttagcaactggacctccagcagct
gcagctctgtctccagaaactcgttaccgggcacaacttgagcagctttcagcgatgggt
tttgtaaatcgtgatgctaacattcaagctttaactgctacaaatggcaatgttaatgct
gctatagaatttttgcttggttaa
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