Ciona intestinalis (yellow sea squirt): 100175494
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Entry
100175494 CDS
T01056
Name
(RefSeq) A-kinase anchor protein 13-like isoform X3
KO
K21066
A-kinase anchor protein 18
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100175494
Membrane trafficking [BR:
cin04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
100175494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
GAF_NLP
Motif
Other DBs
NCBI-GeneID:
100175494
NCBI-ProteinID:
XP_009861927
LinkDB
All DBs
Position
Unknown
AA seq
1763 aa
AA seq
DB search
MNNRTIKMELLPTLAPVYGGGLIVAFLPEDYVLPENIRAFAIFKGSKQRQLTEARVSVED
NAFHAVIPDHEPPEEVEVSVYIQLPSGEGDTIASERFTYYLDQTCYLARYLAASVHKLES
LEDWDYIQGPNFSLEQEDFSTLDERLTSAFQHLILPLDWNLLGDHDELIPRETLFHFAAR
LGLSTFVTLLLEKNGAQECLALRNRHNELAESIARERGFEGLADLITDPHAHGVIRWESK
EQIGPTTVLKQHSFGTISTSSHPYLDTWPPIEKEIEALTATSLPPSSSLPLRYNMNSTWD
EALEESPSSRTQSMFHSESYDSEFASPDSLFPPSFEPDYRQKLKDTHRTRELESTSSNEV
LAGNLKHLQEISEEIQYLRHKDIERLRHAGPNDVARLSNSCPDLAQEHSALVGDETLDDV
YAPPTPVMPRNRRALPPGIAEEFLEPQDVEATEDLPSPSGLHRRHSWHSSESLPDQDVTS
PGLQRRFSFQHDSNEELSKAEETEPPTSMVSPTVVRRAEKNNMTMFSVVAPSVTVTQAQP
LQSDTSLKVPIKQRPKSISENNSNNVDGLGDMGKPPDRRFTIAEGIITDPAPFSDKGNSQ
HPPPVPPKPASKKLLTRKMSFLEKMRNSTKNKPKVKVKQLAELKFGISSRQLDEEETYES
TDAIKENNTSKNKSNKRPSIIQRPQSMMLNRPSQYSVGNPPTANYAQQPGRSRPISTIGG
PHSRRNTGSNSSDLTVPKDRSGSNRSSYYDDDEGSRTPPNVSYMNNMKDVISASFESLDE
AALDIAELEKDPDLALKTAEPEAWSVKADRKTLKKMSKKDVKRQDNIFEFIQTERNYLTT
LKIMQKIFARGLVKEAHIDPEVVEKLFPSIDEHVDYVANFVAKLSDRQVEGKVVDGIGDI
CVAQWSGTSGNNMKRVFGDFCCKQNEIVATHKELYKTDKKFSTFIKKCDKNPLTRRQGIP
ECALLVTQRVTKYPIMLQTLLENSNKKDHTEDYAELERALDLSREIAKDVDEQVQAHERE
QLLYEIYEKTDTKTTTAFKEGRKFARKDLLKRNRKLLYSSNAVQWKISNSKKFTETFFLL
LSDCFVLLQENNGKYTFPSGQPAAVPLMRLIVREVANDEKGLYLISTANSQMYELKVDKA
DDCKTIMQVVRSAVGNCTEEDEGIPSEDEEERKLQEQKLDKARRMIDLLEQKDDAINRLL
KQKMEVFRSLAESVERGTAISHMSFNYPTYFLSTEDESSNNNKLTLPPGTPVLLKAIEQV
RKMSHAFCGSGGLSRQPSSVGEHESGSRSPSILPKRSDTFGGFDNGKEPSSPRGKWMNNS
QSEGKLIEQNSQTTMTSESKRDSGLVDSDVLVRRVDSQGSIHKEAWGINEPSGSPTPSPT
ASTSGDSYIPPTSDQILTITNLSHLLHSYMSISTQQDTHMEKLQQQLLLVQDKNSKKRGG
NLQEVELKRNHIKQQEQLDDLRKQQHQLKIEREQWHRTNERFQKSMAAEKQELEAEKAKI
HQEKLENERQRDEIHRAKEDYQREMARLRDLQRRSHYDIHISSSTSSLPTSTVNRNNSNN
GADVTDLRLSSGDGKTLSSSKSHSSLHSSSDVGTKGPPSPTYASAADYPRTFPGSKRDSG
SASAPSTSQLPLHLQYSATNQLSALQAPRHQEFPSKLSKLASSTKGKPMTSGESKSGLMH
QMIPSKLTKLASGQSGQHVSTTNSSKLRTSQTKKSDHGSSLQVPSRSSNNRSPSPIFKNF
LSKEKTSAGDSKRNSQSNSELYL
NT seq
5292 nt
NT seq
+upstream
nt +downstream
nt
atgaataatcgaacaattaagatggagcttcttcctactttagcacctgtttacggaggt
ggtcttatagtcgcatttctacctgaagattatgttttacctgagaatattcgtgcattt
gccatctttaagggcagcaagcaacgacagctaactgaagctagggtctctgttgaagac
aatgctttccatgcagttataccagatcatgagccaccagaagaagtagaagtatctgtg
tatattcaactaccctctggtgaaggggataccattgcaagcgagcgatttacttattac
cttgatcaaacctgttatcttgctcgctacttggctgccagtgtgcataaactggaaagc
ttagaagattgggattacatacaaggacccaacttttcattggaacaagaggatttttct
accttagatgaaaggcttaccagtgccttccaacatctaattctacccttggattggaac
ctgcttggtgaccacgatgaactgattccgcgtgaaaccctttttcatttcgccgctcgt
cttggtttatccaccttcgttactcttcttctggaaaaaaacggagcacaggagtgtttg
gcgttgaggaatagacacaacgaacttgcagaatcgattgctagggagcgaggatttgag
ggacttgctgatcttataacagatccgcacgcacatggtgtaattcggtgggaaagcaaa
gaacaaataggaccaaccacagtgctaaaacaacatagttttggaaccatatctacttct
tcacatccttatctggatacctggccccctatagaaaaggaaattgaggctcttactgca
acctctctcccgccgtcgagcagtcttccattacgatacaatatgaattcaacttgggat
gaggcattagaagaaagtccgtcctctcgtacacagtccatgtttcatagcgagagctac
gattctgagttcgcttcgccagattctttgttcccacctagctttgaaccggattatcgg
caaaaattaaaggatacgcacagaacaagggagttagagagcaccagtagtaatgaggtt
cttgctggaaacttaaaacacttgcaggagatcagtgaagaaattcaatacttgcgtcat
aaagatattgaacgactgagacatgcaggaccaaacgatgtagcacgactaagcaactcg
tgtcctgatttagcacaagagcactcagcacttgtaggagatgaaacattggatgacgtc
tacgctcctcccaccccagtgatgccaagaaatcgacgagctctacctcctggtatagct
gaggaattcctggaaccccaggatgtagaagcaacagaagatctcccgtcaccctcaggt
ctccacagaagacatagttggcattcatcggaaagtcttccggatcaggatgtgacgtca
ccagggctccaaagaagattcagttttcagcacgactctaacgaagaactaagcaaggcc
gaagaaacagaacccccaacgtccatggtgtcgcccaccgtagtacgacgagcagagaag
aataatatgacgatgttttccgtcgtcgctccttcagtaacagtcactcaagctcaaccg
ttacaaagtgatacttcattaaaagtgccgatcaaacaacgaccaaaaagcatctccgaa
aacaacagcaataacgttgatggacttggggatatggggaagccaccagatcgtcgtttc
accatcgctgaaggcatcattaccgaccctgctcccttctcggataaaggaaactcccag
cacccaccccctgttccccctaaacccgcaagcaagaagcttctcactcggaaaatgagt
tttctagaaaaaatgcgcaacagcacaaagaacaaaccgaaggtcaaagtgaagcaacta
gcggaattgaaattcgggataagcagcagacaattagatgaggaagaaacatacgagtca
accgatgcaataaaagagaacaacacttccaagaacaagtcgaataagcgtccgtcgatc
atacaacggccccagagtatgatgttaaacaggccatcacaatactcagttgggaaccca
ccgacagcaaactatgcccaacaaccaggccggagtcgacctatttcgactattggagga
cctcactcacgcagaaacacaggttcaaactcgtccgatcttaccgtaccaaaggaccgc
agtggtagcaacagatcgagttactacgatgacgacgaaggcagccggacgcctcccaat
gtatcatacatgaacaacatgaaagacgttatttctgcctcttttgaatcccttgacgaa
gctgcattggacattgctgaactcgaaaaggatccggatctagcccttaaaacggctgag
cccgaggcatggagtgtaaaggcggacaggaaaaccttgaaaaagatgtcaaagaaagat
gtgaaacgacaagataatatattcgagttcattcagacggagaggaattacctcacgact
ttaaagataatgcaaaagatattcgccaggggtttggtcaaagaagcacacatcgaccca
gaagttgtggaaaaattgtttccctcaattgacgagcatgtagattacgtggcgaacttc
gtagcgaaattgagcgaccgtcaagtcgagggaaaggttgtggacggtataggcgatata
tgcgtggcccaatggtcgggcacgagcggtaacaatatgaaacgagtgttcggtgatttc
tgttgcaagcaaaacgagattgtggcaactcataaggaactttataaaacagataaaaag
ttcagcacgtttatcaagaaatgtgataagaacccactgacacgtagacagggaattccc
gagtgcgcgttactcgtcactcagcgtgttacgaagtatccgatcatgctgcagacgctt
ttggaaaattcaaataaaaaagaccacacagaggattacgctgagttggagcgagcgctt
gatttatcacgggagatcgccaaggatgtagatgagcaagtacaagctcatgagcgtgag
caactgttgtatgaaatctatgaaaaaactgatacaaaaactacaaccgctttcaaagaa
ggacgcaaatttgcaagaaaagacttgttgaaaagaaaccgcaaacttttgtacagttcc
aacgcagtgcagtggaaaatatcgaattcaaagaagtttacagaaactttcttcttattg
ttgtccgactgttttgttttactgcaagaaaataatggaaaatatacatttccttctgga
cagcctgcagcagttcccttaatgagattgattgttcgagaagtagcaaatgatgagaaa
ggtttatatctcatcagtacagccaactcacagatgtacgaattaaaagtggataaagct
gatgattgtaaaaccatcatgcaagttgtgaggtctgctgtgggaaactgcacagaagag
gatgaaggaatcccctctgaagacgaagaggagcgaaagcttcaggagcaaaagttggat
aaagctcgtcggatgatcgatttactcgagcaaaaagatgacgcgataaatcgacttctt
aaacagaagatggaagttttccgatcgttagctgaatctgttgaacggggaacagcaatt
tcacacatgagtttcaactacccaacttatttcctttccaccgaagatgaatcaagcaac
aacaacaagttaacattaccaccgggtaccccagttctgctgaaagctattgagcaagta
agaaaaatgtcgcatgcattctgcggatcaggtggtttgtcccgccaaccctccagtgta
ggtgaacatgaaagtggatcacgatcaccatcgatcttacctaaacgttccgatacattt
ggtggattcgataacggaaaggaaccttcttctcctagaggcaaatggatgaacaattca
caaagcgagggaaaacttattgagcaaaacagtcaaaccactatgacatcagaatcaaaa
cgtgattctggattggttgattctgacgtcctcgttcgaagagttgattctcagggaagc
atccacaaggaggcatggggaataaacgaaccatcgggaagtcccactccatctcccacc
gcatccacaagtggtgactcttacattcctccaacatcggatcaaatcctcaccatcacc
aacctcagtcatctactacattcatacatgtctatatctacacaacaggacacacacatg
gaaaaactacaacagcagttgctcctcgttcaagataaaaactccaagaaacgaggagga
aatttacaggaggttgaattaaagagaaatcatattaaacaacaagaacaacttgatgat
cttagaaaacaacagcatcaattaaaaattgagcgtgagcaatggcatcgaacgaacgaa
agattccagaagtcaatggctgctgagaaacaagaacttgaggctgaaaaagcgaagata
catcaagaaaagttggagaatgagagacagagagatgaaattcatcgagcgaaggaggat
tatcaacgagagatggctcgtctccgtgatcttcagcgaagatcccattatgatattcat
atttcttcctccacatcctccctaccaacatccactgtcaatcggaacaatagcaataat
ggagcggatgtcacagatcttcgtctttcttccggagacgggaagactctttcctccagc
aagtctcactcaagtctccactcctcctcggatgttgggacgaaaggtcctccctcaccc
acgtacgcttctgcagcagattatcccaggaccttcccgggatcaaaacgagactccggg
agcgcttctgcaccatccacctcccaacttcctcttcatcttcagtatagcgcaacaaac
cagttatcagcattgcaggccccaagacatcaagagtttccttccaagttatccaaactt
gcttcgagcacgaaaggtaaaccaatgacttctggtgaaagcaaatctggtttaatgcac
cagatgataccaagcaaattgaccaagctcgcctcaggtcaatcgggccaacatgtgtcc
acaacaaactccagcaagctccggacctctcagacgaagaagtcggatcacgggagcagc
cttcaagtccctagcaggtcctccaacaatcgctctccttctccaatcttcaaaaacttt
ttatcgaaagagaaaacgagcgcaggggattcaaaacgcaactcacagagcaactccgaa
ctttacttatga
DBGET
integrated database retrieval system
