Ciona intestinalis (yellow sea squirt): 100175497
Help
Entry
100175497 CDS
T01056
Name
(RefSeq) very long-chain acyl-CoA synthetase-like
KO
K08749
solute carrier family 27 (fatty acid transporter), member 6
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100175497
Transporters [BR:
cin02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
100175497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
100175497
NCBI-ProteinID:
XP_002123669
Ensembl:
ENSCING00000004468
LinkDB
All DBs
Position
8:2160663..2170452
Genome browser
AA seq
623 aa
AA seq
DB search
MFKLNCVLPYAVAVPAGFVLLWQLIKRWYPWIPEDFAFLSKLIRGLRLLSFYRKNNIAVC
DRLAEVAKATPDHPFLVYEDDKFSYMQMHKWVNKCGRTFRSMGVQPKDKVGLMMMNEPAF
IAVWLGCNRIGAICSFLNFNLRSKSLMHCIDLSDTKIIIAGSDAAILEALNEVESELKER
GIEVYVYGEENEKFKSLSPVVDKEISDDIPRSWREDVTSADVIGYIFTSGTTGFPKAVNM
DNRKFFAGAVLLSFANPSPSDVIYTSLPLYHSSGLCIGVTGAIVHGCTCVLRKKFSASKF
WPDCCKYNVTIVQYIGEILRYVCKQPETPEDTKHSVRLIIGNGLRPDVWKQFLERYGADI
HVLEFYAATEGNVGFVNQHNKFGCVGTFSPLLRKFGSAIIKFDVNTEELVRDKNGRPIRC
GPNEPGLLVAKITAHTAISSYKGKKSLTEKKVLKNLFKEGDSYFNTGDLLMYDDQHRLYF
CDRVGDTFRWKGENVSTNEVSDTVVHAEGIRECNVYGVQVPGHDGRAGMVTVVLESDELD
CEALYKHVEHALPSYARPMFVRVQPELEVTGTFKQRKVNLQKEGFDLEKVSGDKLFYMNI
QAKTYSPITPEIQKKIETGEIRL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagttaaattgtgttctgccttatgctgtagctgtccctgctggctttgtctta
ttgtggcagttaatcaagagatggtacccttggattccagaagattttgcttttcttagc
aaattaattagagggctgagactactttctttttatcggaagaacaatattgctgtatgt
gatcgtttagctgaggttgccaaggcaacccctgaccacccattcctagtatatgaagat
gacaagtttagttacatgcagatgcataaatgggttaacaaatgtgggcgtacctttcgt
agtatgggtgtgcaaccaaaagataaggttgggttgatgatgatgaacgaaccagctttc
atcgccgtgtggcttggttgtaacaggattggagcaatttgttcttttcttaatttcaat
ttgcgttccaagtcactaatgcactgcattgatctctcagacactaaaattataatcgcc
ggtagcgatgcagctattcttgaggctctaaatgaagtggaaagtgaattgaaagagcgt
gggattgaggtttatgtttacggagaggaaaatgaaaaatttaaatctctttcacctgta
gttgataaagagatttctgatgatatacctcgatcatggagagaagatgttacttctgcg
gacgtcataggctacatattcacatcaggcactacaggattccctaaagctgttaacatg
gacaatcgaaagttttttgctggagcagttcttctttcttttgccaacccttcaccaagt
gatgtgatttatacaagcctccccctgtaccacagctcaggtctttgtattggcgttaca
ggagcaattgtacacggatgtacatgtgttcttagaaaaaagttttctgccagcaaattt
tggcctgactgctgtaaatacaatgtaaccattgttcaatatatcggggaaatcttaaga
tacgtttgcaagcaacctgaaacacccgaggatacaaaacactctgtccgtcttataatc
ggaaatggtcttcgtcccgatgtgtggaagcaattccttgagcgttatggcgcagacatt
catgtccttgagttttacgcagctactgaaggcaatgtcggatttgtcaatcaacataat
aagtttggttgcgtgggaactttttcaccgttactgagaaaatttggatcagcgattatt
aagtttgacgttaacacagaagagttggttcgtgataaaaatggaagacctattcgctgt
ggtccaaacgaaccaggtttattggttgcgaagattactgcacatactgccatttcaagt
tataaaggcaagaagagtctaactgagaaaaaagtcttaaaaaacctatttaaggaagga
gactcttatttcaacactggtgacttactcatgtatgatgatcagcacagactttatttt
tgtgaccgagttggcgacacttttcgctggaaaggtgaaaatgtttcaactaatgaagtg
agtgatactgttgtgcatgcagaagggataagagagtgcaatgtgtacggggttcaagta
ccaggacacgatggcagagctggaatggtaactgttgtattggaatcagatgaattagat
tgtgaagctttatacaaacatgtggaacatgctttgccttcttatgcaaggccaatgttt
gtcagggtccaaccagagctagaagtgacaggcacctttaaacagaggaaagtcaacttg
caaaaggaaggttttgacctggaaaaagtttctggcgataagctgttctacatgaatata
caggccaaaacatattcaccaattacccctgaaatacagaagaaaattgaaaccggagaa
atccggctttaa
DBGET
integrated database retrieval system
