Ciona intestinalis (yellow sea squirt): 100175518
Help
Entry
100175518 CDS
T01056
Name
(RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03015
mRNA surveillance pathway
cin04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100175518
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100175518
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cin01009
]
100175518
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cin03019
]
100175518
03036 Chromosome and associated proteins [BR:
cin03036
]
100175518
Protein phosphatases and associated proteins [BR:
cin01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
100175518
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
100175518
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
100175518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
HEAT_ATR
ArsD
Motif
Other DBs
NCBI-GeneID:
100175518
NCBI-ProteinID:
XP_002127811
Ensembl:
ENSCING00000023725
LinkDB
All DBs
Position
8:5846613..5848946
Genome browser
AA seq
430 aa
AA seq
DB search
MMSTKTTPLPLLANTPVHARLELFAKKMHFCCHTFNFEKVNIELKEKELKRIYLTEIIHF
MEESKGILIEPIYAISFAMFCRNVFRSLPPKNPDYDPDEDDPISDPAWPHLQLVYSFIVR
VLESPDFQPSEAKQFIDHKFVEHLIEMFSSDDINERECLKTVLHRIYGKFLGLRSYIRGE
VNNKFLEVIYEDLSFPGATEILEVMGSIINGYACPLKHEHIHFLFSVLLPLHTSSKLQQF
QAQLVYCVVQYLEKDPSLTEKFTKRFLKLWPKTVTSKEVMFLGELEEIIDVMQPAEFLKV
QEDIFLRLAKCIKCEHFQVAERALYFWDNEYIVSLIEVSAAQILPLVLSSLISVSNHHWN
KTITSLAANILKNFMSGNQKFFTKMVMTMKSKKQSEKERAERSKELWRSLEEQAAMNRKI
ENSSSVLEEK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgactaaaaccactccgctgccattacttgctaatactcctgttcatgcccgt
ttggaattatttgccaagaaaatgcatttttgctgccatacattcaacttcgaaaaagtg
aatatagaactgaaagaaaaggaacttaaacgaatctacctcacagaaatcatccatttt
atggaagagagcaaaggcattttaatcgagccaatatatgcgatatcgtttgctatgttt
tgtcgaaacgtttttagaagtttgccccctaaaaatccggattatgaccccgatgaagac
gaccctatttcggaccccgcttggccgcatcttcaacttgtgtattcgtttatcgtgcga
gtactggagtctcccgatttccaaccgagcgaggcaaagcaatttatcgaccacaaattc
gtagagcatttgattgaaatgttcagcagcgacgatattaacgaaagagaatgtttaaaa
actgtcctgcaccgaatttacggcaagtttttaggcctcaggtcgtatataaggggcgag
gttaacaacaagtttttagaagtaatttacgaagatttatcatttcctggagctacagaa
atactcgaagtgatgggtagcattataaacggctatgcatgtccgttaaaacatgagcat
atacatttcttgtttagtgtcttacttccgctacatacatcgtcaaagttgcagcagttt
caagcccaactagtatactgcgtagttcagtatttagaaaaagacccgagccttacggag
aagttcaccaaacgattcttaaaactgtggcctaaaaccgttacctcaaaagaagtcatg
tttcttggcgaactggaagagataatagacgtcatgcaaccggcagaattcctaaaagtg
caagaagacatctttttgcgactcgcgaaatgcataaaatgcgagcattttcaggtagcc
gagagagcgctgtacttctgggacaacgaatacatagtcagccttatcgaagtcagcgct
gcacagattctaccgttggtattatcaagccttattagcgtctcgaaccaccattggaat
aaaacgatcacatcattggctgcaaatatactgaagaatttcatgtccggaaaccagaag
tttttcacaaagatggtcatgacgatgaagagtaagaagcaaagtgagaaggagagagct
gagagatcaaaggagttgtggaggagcttggaagagcaggctgcgatgaataggaagatt
gaaaattcttcttctgttttggaagaaaaataa
DBGET
integrated database retrieval system
