Ciona intestinalis (yellow sea squirt): 100175535
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Entry
100175535 CDS
T01056
Name
(RefSeq) sorting nexin-19
KO
K17930
sorting nexin-19
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cin04990
]
100175535
Domain-containing proteins not elsewhere classified [BR:
cin04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
100175535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Ribosomal_L50
Motif
Other DBs
NCBI-GeneID:
100175535
NCBI-ProteinID:
XP_002125820
LinkDB
All DBs
Position
Unknown
AA seq
893 aa
AA seq
DB search
MMEKSTLSVIAVVFFVVLYQVAVWPLLFTVSVFCVVTSTGLYMLVANGTLLPIEGIIMDL
YSKVSGKNLPSQDSKEEVLQENLNDTPSKYDDEITRKLRELTGHIVRDFILDWYNTVSDN
VEFVQEAFEVFEHVLTEVRSRVTAINSHTFVRVLLYRLKRHYTCYKQAVDYAQSVNNTDS
TRKEQTVVVTYEKLNGHLAMSNLPDTESDHLRSLTAILLKGLLPSDYKLTGTSMYLVREL
ISSNVMLAVVDMATKPDWINTMIIRVLEDDVEDESGSSTYSSSSESVETLEAEDDTRNCI
VLPPTLESSVHEEQPATFQPTEPSVRYSVSMDKNTVEIDLPIHTYTDTDNVNTLEFQSEH
LNTMQDDQEGSESIEVDTELVHFSDSGEGRDKNVDKNFNKHTKLPTVASDDFNLPAFPPR
RPRYFRHIRIHEAVTVDEAFEGGGRYTLYKITYFAPPHKQINKRRTSNFNLSNSSSNTME
ADLKEFQVQRRFREFLTLQDRLNEKQKIRKLMTKIRGPSRMFPMPIGNLDKQYIEKRRKL
LQAFMRELCSYPEISETVELRQFLAYTTDPRIAFVRKSSEYIPRFDKMFKNAFNELIGAA
SNKLSDKFSLEQDDVYIQPHTQISASKSMPILNESKPSCSSHRSAHTKHKGPVTRFKNIM
LGKTLDSDKYEDVVRDYSPFTGPRNSNLVTFGRKWRSPENLLTNRTRFCASSMGGRRTQG
DGCDNVISLEQHGNGLLGDCILAGQVFRVAKIIWNIPLGKHSLSVVCVARFVQQYMEIKI
QQLLQKDKWMHYLKTFQNSLWPSGVWGETDTKENEDPKENYDKAQLVLEDTFPDVLRFLV
GDAEYKHGVSSLLESFQHPVINRHLIYHLLDSSLQLLFPDFQNILAKRRNISI
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaaaatcaactttaagtgtgattgctgttgtgttttttgtggtgttataccaa
gtggctgtatggcccctgctgttcactgtcagtgttttctgtgttgttacttctactgga
ctgtatatgcttgttgctaatggcacattattgccaattgaagggattatcatggatcta
tactcaaaagtgtcgggcaaaaatttaccaagccaagattcaaaagaagaagtcttacaa
gagaatttaaatgacacaccatctaaatacgatgatgaaataactcgtaaactgcgtgag
cttacgggtcatattgtgagagatttcattcttgattggtacaacactgtgagtgacaat
gttgaatttgtccaagaagcttttgaagtattcgaacacgttcttactgaagtgcggtca
cgagttactgctattaattctcatacattcgtccgtgttttattgtatcgtttaaagcga
cattatacctgctacaagcaagcagtggactatgcacagtctgttaataacactgactca
acaagaaaagaacaaacagtggtagtaacttatgaaaagcttaacggccatcttgccatg
tcaaacttacctgacactgagtctgatcatcttcgttccctcactgctattcttctcaaa
ggattactaccttcagattacaagttaacagggacatcaatgtatcttgtacgtgaactt
atatccagtaatgtcatgcttgctgtggttgacatggcaactaagccggactggatcaac
acaatgatcatccgtgttcttgaagatgatgttgaagatgaaagtggatcttccacttac
tcttcaagttctgagagcgtggaaacattggaagcagaggatgatactcggaactgtata
gtacttcctcctactcttgagagcagtgttcacgaggaacagccagccacattccaaccg
actgaaccctcagttcgatactcagtgtcaatggataaaaatacagtggagattgattta
ccaattcacacttatactgatactgacaatgtaaatacgttagagtttcaatcggaacat
ttgaatacaatgcaagatgatcaagaaggctctgagtcaatagaagtcgacacagagttg
gttcatttctcagacagtggggaagggcgtgacaaaaatgtcgataaaaatttcaacaaa
catacaaagctaccaactgtggcttcagatgattttaatttgccggcatttcctccaaga
agacctcgttattttcgccatattcgaatccatgaagcagttactgtggatgaggcattt
gaaggtggtggaagatacacgttgtataagataacatactttgcaccacctcataaacaa
attaataaaaggaggacatcgaattttaatctttctaattcctcttccaataccatggaa
gctgatcttaaggagtttcaggtacaaagaagatttcgggagtttctgactcttcaggat
cgattaaatgagaagcaaaagatccgaaagttgatgacgaagatcagaggaccttccagg
atgttccctatgcccattggtaacctcgacaagcaatacattgaaaaaagaagaaaactt
cttcaagctttcatgcgtgagctttgttcgtatccagagatcagtgaaactgttgaacta
cgtcaattcctcgcgtacacaactgatccacgaattgcatttgtaaggaagtcttcagaa
tatataccaagattcgacaaaatgttcaagaatgcatttaatgaattgatcggtgcggca
agcaacaaactcagcgataaattctcccttgaacaagatgatgtttacatccaaccacac
acacaaatatctgcctctaaatcaatgcccattctcaatgagtcaaaaccctcatgtagc
tcccatagatcagctcacacaaaacacaaaggaccagttacgaggttcaagaacataatg
ctgggcaagactcttgattccgacaagtatgaggacgtagttcgagattactccccattt
actggacctagaaactcaaaccttgtcacatttggaagaaaatggagaagtcccgagaat
cttctaaccaaccgaacacgattctgtgcatcttccatgggaggacggagaacacagggt
gatgggtgcgataatgttataagtttagaacaacacggcaacggcttgcttggtgattgt
atcttagcaggtcaagtattccgagttgcgaagataatctggaacattcctcttggtaaa
cattccttatctgttgtttgtgttgcacgatttgtacagcagtatatggaaatcaaaatt
caacaactgcttcaaaaagataaatggatgcattatttaaagacattccaaaactcactg
tggcctagtggcgtatggggcgaaactgacacgaaagaaaacgaagatccgaaagaaaat
tacgacaaagctcagctggtgcttgaagacacatttcctgatgtgttgaggtttttagtt
ggggatgcagaatataaacatggagtttcatctttgctggagtccttccaacatccagtg
ataaatcgtcatcttatttatcatctcctagactcttcactccaacttctcttcccagat
tttcaaaacattttagcaaagcgacggaatatctcaatttag
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