Ciona intestinalis (yellow sea squirt): 100175601
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Entry
100175601 CDS
T01056
Symbol
syn
Name
(RefSeq) synapsin
KO
K19941
synapsin
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100175601 (syn)
Membrane trafficking [BR:
cin04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100175601 (syn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synapsin_C
Synapsin
Synapsin_N
RimK
Motif
Other DBs
NCBI-GeneID:
100175601
NCBI-ProteinID:
NP_001161823
Ensembl:
ENSCING00000008084
UniProt:
D1FXZ2
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Position
5:complement(3361207..3385472)
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AA seq
519 aa
AA seq
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MSSMQNAMNFLKRRFSDTNFNSNLPNGYLESDDDVSVTSSVSRGTPQKQQIAQPGINQQN
KINVNPAQSGQVSSTGGFFASLASGNPLAVLKVDGNEQIKTVLVVDEQHTDWSKYLKGRK
IHNDYTVRVEQAEFSELSLSSHSVNGVTVDINCYRNGNKVVRSFKPDFLLVRQTPRSMAQ
GEDFRNLVIGLKYGGIPSVNSLHSQFNFMDKPWTFSQLIRIQKRLGPEKFPLVEQTYYPS
HKQMLTSSHFPVVLKIGHAHRGMAKFKVENHYEFQDVVSVAALTNAYVVSETFIDSAYDI
RVQKIGGNYKSYIRTSISKNWKANTGSAMLEETPVTERHKLWVDACSEMFGGLDIVAVKA
VHGKDGRDYIIEVVDCSMPLIGERQEEDRRMISDLVMQRMTACTRPRPDHTPSTAASVYG
RSYSSQNTSREMTPQRNVQIPQNRPNHAIPSCPPSAPLSSHSSEPPSPTATRRSNSVSEP
SPPGGDRERIRSTTVSEDKESKAEKIRSLRQSFANLFSD
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaatgcaaaatgctatgaactttttaaaacgtcgtttttctgacactaatttt
aactcgaatcttccgaacggatatctggaaagcgacgatgacgtcagtgttacgtcatca
gtttcccgaggcacaccgcaaaagcaacaaattgcacaacctgggattaatcaacaaaat
aagataaatgttaacccggcacagtcaggtcaagtcagcagcactggcgggttctttgcg
tcacttgcatcaggaaatccactggcagttttaaaagttgatggtaacgaacagataaag
actgttcttgtggtcgacgaacaacatacggactggtccaaatatttgaaaggcaggaag
attcataatgattatactgttcgtgtggaacaagcagaattcagtgaattgagtttatca
agtcacagcgtaaatggagtaactgtcgatatcaactgttacaggaacggcaacaaagtg
gttagatcattcaaacctgattttctgcttgtccgtcaaactcccagatcgatggcccag
ggggaagattttaggaaccttgtaattggacttaaatacggtggaattccttccgtgaat
tctctgcattctcagtttaactttatggacaaaccgtggacgttctctcagctgatacga
atccaaaagcgattgggtccagagaaattccctcttgtggaacagacgtactacccatca
cacaagcaaatgctgacgtcatcacactttccagtggttctcaaaatcggtcatgcgcat
cgaggcatggcaaagtttaaagtcgaaaatcattacgagtttcaagacgtagtaagcgtg
gccgctcttaccaatgcatacgtggtgtccgaaaccttcattgattctgcatacgatata
agagtacagaagataggtggaaattataagtcatatattcgaacgtcaatatcaaagaac
tggaaagcgaacacgggttctgccatgttagaagaaaccccagtaacagaacgacacaag
ctatgggtggatgcttgcagtgaaatgttcggaggtcttgatatagtggcggtaaaagct
gtgcatgggaaagacggaagagattatattattgaggttgtggattgttcgatgccattg
atcggtgagagacaggaagaagaccgtaggatgatcagtgatcttgtgatgcagaggatg
actgcttgtacaagaccccgcccagaccacaccccttcaactgcagcgtcggtatatgga
agaagttactcgagccaaaatacgagtcgagaaatgacgccgcaaagaaacgtacaaata
ccacagaaccgtccgaaccatgccattccatcttgtccaccatcggcgccactgagcagt
catagctctgagccaccatcgcctaccgccacccggcgaagcaacagcgtcagtgaaccg
tcaccaccaggaggagaccgagagcgaattaggtctacgactgttagcgaagacaaagag
agcaaagcggaaaagatccgaagcctgcgtcagtcatttgcaaatttattttctgattaa
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