Ciona intestinalis (yellow sea squirt): 100175614
Help
Entry
100175614 CDS
T01056
Name
(RefSeq) mitochondrial sodium/calcium exchanger protein
KO
K13754
solute carrier family 24 (sodium/potassium/calcium exchanger), member 6
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100175614
Transporters [BR:
cin02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
100175614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
100175614
NCBI-ProteinID:
XP_002130159
LinkDB
All DBs
Position
4:4600918..4606943
Genome browser
AA seq
612 aa
AA seq
DB search
MKLVVLFALFFLVTFCHSSNAETFTQPTNASLVFGQIFGDIHDTECREYHKIKDSSLWCA
FIKTTPNCQMDEGFVNYLKGAFCSFVPRLLPLISVLYGLWLIFLFIGLGTTAEGFFCPSL
EYIAHNLKLSQNIAGLTIVAFGNGSPDIFSAIAAFTNSNPTAAGVAVGALLGAATFVTTV
VAGLVATTQTFTLAQRPFMRDMTFFIAAAFWAFYLLYTNEINIYSSVGFLGLYVFYVTIV
IVGRYIHQRQREKLKKLLGDVAKIPEDSGEGINGSPSTSMDENTPLLVGTPRNNNMKEDG
GEWIDSKLRSGHHDEKHLHANEISVDSCCIEDDDHQSTLLIFLHGINPIPRDDWNEAKHV
FKILLLCQAPWNFVCKITIPIILLNQHNNGWNRPLNSLSLLISPIFCVFATKGGSIYIVG
KFPLWSFMLVIGVVMSTICWLFTDNRMKPRFHWISAYIGFIVAVVWTYTIANEIVNLLQT
FGAILNVSNVIMGLTFLAWGNSIGDVVADVALARQGFPRMSLSACFGGPLFNLLIGIGLP
CTITIIKTGKPVQVAFTHLEAVLCAGLLTSLCLTFIVLPLRKFRMTPAYGCMLVVVYILF
LTVAILAGLNVI
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttgttgttttgtttgctttgttttttcttgttactttttgccacagtagtaat
gcagaaacattcactcaacctactaatgcaagtctggtgtttggtcaaatttttggagat
attcatgacaccgagtgtcgtgaataccacaaaattaaagattcttcactgtggtgtgca
ttcataaaaactacccccaactgccagatggatgaaggttttgtcaattacttgaaagga
gcgttctgtagttttgtcccaaggttgcttccacttatatctgttctttatggtttatgg
ttgattttcctgttcattggtcttggaacaacagcagaaggatttttttgtccttcctta
gaatacattgcccacaacctgaaactcagtcaaaacattgcaggtttaaccattgtagca
tttggtaatggctctccagacatcttcagtgcaatcgccgcttttacaaattcaaaccct
acagctgcaggtgtagctgtgggggctttacttggagctgcgacttttgtcacaactgta
gttgctggattggttgccacaacacagacattcaccctcgcccagcgaccattcatgcgt
gacatgacattctttattgctgcagcattctgggcattttatcttctttatacaaacgag
attaacatatacagctcagttggtttcttgggactatatgttttctatgtgacaattgtg
attgttgggcgatacattcatcaaagacagcgagaaaagctgaagaagttgcttggtgat
gttgctaaaatacctgaggatagtggagagggaataaatggatcaccatccacttctatg
gatgaaaatactcctcttcttgtgggaactccaagaaacaacaacatgaaagaggatgga
ggtgaatggattgattcaaaactaaggtccggacatcatgatgagaaacatcttcatgca
aatgaaatatcagttgattcatgttgtattgaagatgatgatcatcaatcaactcttctt
atcttcctccatggaataaacccgatcccacgagacgattggaacgaagcaaaacatgtt
ttcaaaattcttttgctgtgccaggcaccttggaactttgtttgtaaaatcacaatccca
attattctgttgaaccaacataataatggatggaatcgaccgctaaattcacttagtctt
ctaatttctccaatattctgtgtatttgccacaaaaggtggttcaatatacattgtcggc
aaatttcctctgtggtcattcatgcttgtcattggtgttgtgatgtcaacaatatgctgg
ttgtttacagacaatagaatgaagccaagatttcattggatttccgcctacattggtttt
atagtagctgtggtttggacttacacgatcgcaaacgaaatagtcaaccttctccaaaca
tttggcgctatcctcaatgtaagcaatgtaatcatgggactaacattcctagcttgggga
aattctattggcgatgtggtggctgatgtggcacttgcacgacaaggatttccacgaatg
agtttatctgcttgctttggtggacctctcttcaatttattaataggaataggtctccca
tgtactattaccatcattaagacaggaaagccagttcaggttgccttcacccacttagaa
gctgtgttatgtgctggtttactaacaagtctctgccttacctttatagtcttaccttta
cggaaattccgtatgacaccagcgtatggttgtatgttggtagtagtctatattctattt
ctaactgttgcaatattggctggtttaaatgttatttag
DBGET
integrated database retrieval system
