Ciona intestinalis (yellow sea squirt): 100175616
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Entry
100175616 CDS
T01056
Name
(RefSeq) ileal sodium/bile acid cotransporter-like isoform X1
KO
K14342
solute carrier family 10 (sodium/bile acid cotransporter), member 2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100175616
Transporters [BR:
cin02000
]
Solute carrier family (SLC)
SLC10: Sodium bile salt cotransporter
100175616
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SBF
SBF_like
Choline_transpo
ECSCR
TMEM154
Motif
Other DBs
NCBI-GeneID:
100175616
NCBI-ProteinID:
XP_002120408
LinkDB
All DBs
Position
Unknown
AA seq
367 aa
AA seq
DB search
MDITTFAPNVTTNGTINGTGGNFPKPDPSRQILNILITVMLAIIMIGMGCAVEFPKVIKH
LKKPSGVIVGFFCQFVIMPSIAFGLAKAFQMPEPETLALLILGACPGGSTSNIAAYWIDG
DMDLSITMTTVSSTLGLGMMPLLLYIYTLGFDQSMVVPFETLGVTLAALIVPIALGMIIR
WRFPRHAEKLVKILSILGAIAIIVVAVISIVTFNGVWSILPSQIVCAAIFPAIGMILGYT
ISSIISLIPRIRLHHYQRRTVSLETGVQNTQLAISIIQLSGFTLQETGRMILFPVIYLVS
QAAWIVVIIIVFVAYKQKCKKEDTSDELKAPAGKFKQQGDHNTYGNVNLTFDQNEKSNEK
VTGNSVF
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggatattactacgtttgctccgaatgttaccactaacggaaccatcaatgggactggt
ggtaactttcccaaaccagacccctcacgacagatactaaacatactgattactgtcatg
ctggccatcataatgatcggaatgggttgcgcagtagaatttccaaaagtaattaaacat
ctcaaaaaaccatccggcgtgatcgtgggattcttctgccagtttgttataatgccatcg
atagcatttggccttgcaaaggcatttcaaatgccagaaccagaaacattggctttgttg
attttgggtgcatgtcctggtggatcaacttcaaatattgctgcgtattggatagacgga
gacatggatttgagcataacaatgacaacagtatcaagcacgttaggattgggaatgatg
ccgcttctcttgtacatctacacacttggatttgatcaatcgatggtggtaccctttgaa
acgttaggcgtcactttagcagcgttgattgtaccaatagcgcttggaatgattatcaga
tggagatttcctcgccatgcagagaaactagttaagattctatcaatcctcggagccatt
gcaataattgtagtcgctgtgatttcaattgttacttttaacggagtgtggtccattctt
ccaagtcagattgtttgcgcagcaatttttcctgcaattgggatgatactcggatacaca
atatcttcgattatatcattgattccacgcatacgactccatcattaccaaagacgtacg
gtaagtcttgaaaccggagttcaaaacactcagctggcgatctcaataatacaactatct
ggattcactctgcaagaaacaggaagaatgatcctattcccagttatttatttagtcagc
caggccgcttggattgtcgtaattatcatcgtttttgtggcttacaaacaaaagtgcaaa
aaagaggacacttcagacgaactaaaggcaccggcaggtaaatttaaacaacaaggggac
cataatacatacggcaacgtcaacttgacttttgatcaaaatgagaaaagcaacgagaaa
gtcactggtaactcagtattctga
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