Ciona intestinalis (yellow sea squirt): 100175619
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Entry
100175619 CDS
T01056
Name
(RefSeq) transformer-2 protein homolog alpha-like isoform X2
KO
K12897
transformer-2 protein
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100175619
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cin01009
]
100175619
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cin03041
]
100175619
Protein phosphatases and associated proteins [BR:
cin01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100175619
Spliceosome [BR:
cin03041
]
Common components
Common spliceosomal components
SR proteins
100175619
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_10
RRM_3
Motif
Other DBs
NCBI-GeneID:
100175619
NCBI-ProteinID:
XP_009860266
LinkDB
All DBs
Position
11
Genome browser
AA seq
289 aa
AA seq
DB search
MSDTEAGEYKSKTKSPVKQSRSRSRSRSADSDSSRGSKKSRSLRRSYSRSRSRSYRSRSR
SGSRRRYRRNSGSPRRRYYSRSRSRSYSRGRHSSKSPMSGRKRHIGDRLNPPSGKCLGVF
GLSLYTNDSDLRSVFSRYGRITDINVVIDQKTGRSRGFGFVYFDNDDDAAEAKERANGME
LDGRNIRVDYSITKRAHTPTPGVYVGRPYAKPRDGDRYESRDRYDRGGDRHDRYYERDRY
DRGRYESRDRYRDDYRDRRDSYRRSPSPGYRRRSPSPYYRDRSPRDRYY
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatacagaagctggagaatataaatcgaagaccaagagtccagtgaagcaatct
cggtcccgctcacgatcaagatctgcggattctgattcttcaagaggttccaagaaatca
agaagtttaagacgttcgtattctcgttccagatcacgttcatacaggtcacgttcccga
tctggttcaagacgcagatatcgaagaaacagtggaagtccaagaaggaggtattacagt
agatcaaggtccaggagttattcaagaggccgccacagcagtaaatctcccatgtctgga
aggaagcgtcatattggagacagattgaacccaccaagtggtaaatgcttgggagtattt
ggtttgagtctttacaccaacgacagtgatctcagaagtgtattttcaagatatggaaga
ataactgatatcaatgttgtaattgatcaaaagaccggtcgttcacgagggttcggattt
gtttactttgataatgatgatgatgcagctgaagcaaaggagcgggctaacgggatggaa
cttgatggaagaaatattcgtgttgattactcgatcaccaagcgagctcacacaccaaca
cctggtgtatatgttgggagaccatatgccaagccaagagatggtgatagatacgaatca
agagatcgatatgatcgtggtggtgaccgacatgatagatattatgaacgtgaccgttat
gatagaggaagatatgaaagcagagacagatacagagatgattaccgggatagaagagac
agttacagacgaagcccttcacctggatacagacgcagatctccttctccttactataga
gatagatccccacgtgaccgttactactaa
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