Ciona intestinalis (yellow sea squirt): 100175652 Help Entry 100175652         CDS       T01056                                  Name (RefSeq) rotatin   KO K16484   rotatin Organism cin  Ciona intestinalis (yellow sea squirt) Brite KEGG Orthology (KO) [BR:cin00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:cin03037]     100175652 Cilium and associated proteins [BR:cin03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    100175652 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RTTN_N DUF7385 RICTOR_M Motif Other DBs NCBI-GeneID:  100175652 NCBI-ProteinID:  XP_018672295 LinkDB All DBs Position 1:719377..729417 Genome browser AA seq 1268 aa AA seqDB search MMDSPSGTQGIDLLFKKLGHNIVEIRSRALESIVLKLDHGLLHEGDLVQEKQLMVRLLEW FNFDPSPQQSVVLQLLIRLTQHTSACDVLAAIGGLTFLSRLRPNLDPDTKPQCDVIIDRL LHVSEKDLSKASNENRRCVYGRDDQDNDPHDTTPQVDYPPMDYGYFTQRSITNDGNPPTP PLPTNEALRSIETPCLRFPGFLWHTLTGTDRHVLTSTCASLCSPSPHLVRNACAFLLDVI FRDFPAEIFLQRPSITQTLLTLISARPGGQLMTSSLECLRALAEGLVSRLNFFQDPDMYC PRQGLPFHCESRNGSQGSRVNDSEGSRVASLTGSDIISRSEAEGSVRVERIGGDGRDHQS SSSGSTSHMSHNNSSNNSQGFNSLVWDSSIGDDNDVVALQRTQLNTPQFCIASLEATLPS LKTDSTRLALNIIQTISPLIQLLGKTIRADKLWIDASNVAQNIQSKLCGLLETLGDVLMY HYHMSDNTTQWTNKQWSIHEGRSHRVVFQTMAGFVVDVLQAVVPVEQANKVLKTSLSQAL YVVAIDECMRLGYDEVTDIALEYLKEANHDKYEVVERLRKVVASFTHTHMLHHQYKELQQ ASDINLELIEIIESSLLGLDHRPHPTHITRVVHVISKVFHDNGTEDKIRTTSKQILLRLF AHPLVQVRRYTYEECLNITRISVNVTSAAEHHGHTQSYACRFLLDSEVLYEVCTHGLADT SRLVSYPAQELISALLHGRVLMGEGVWGQLRGAMDGVLPVLQAFSGESEILCTSITTYIA QSHSNDTNALKSWVRGLMLKHRESRGVAANKLQRMFNIKISGLTDLLIMDTPLSLIPRDE LDSFRIRRCIFQEGAVVRMLSVFRSSTTEPTTRIGALRQLSTMLEDPTLHPAFIQHNGLD SITHKLKQLSADDVTILIDDVRPAVSACITIMKLIMRHDAASRDKLSHDHGIIMRLIHLA NLTRLTTAMIHNVCVVLAMLVFHDVLREHVRTPNQPMQVVELSLPSAVVARYQIPFLCPS HHTVSIHRTLTHPPPTMHDEVATGPASSALRIGWNIAAHGNHVPTTCNHATTNMDDDNTM DFCLTESDRTMLVFSHPDTATNLLELFPATADRGQHPKRSKQQTILLECWLSFMYALSFH TDGQLNILKLRDIFDVLVELFKSKTNAQLTLNIIRNLCFHSPSKNRISSNDSVVDVLLSN LDNKQTRMDSSIALLTLLCNNQKAKVHLKGAGLGKRVQHSLDKLSLEGWEGEKKYKRCLE DVLVIMTG NT seq 3807 nt NT seq  +upstreamnt  +downstreamnt atgatggattctccgtctggtacgcaaggaattgatctgttgttcaagaaattaggccac aatattgttgaaattcgaagtcgtgcgcttgaaagtatcgtgttaaagttggaccatgga cttctacacgagggtgatttagtgcaggagaaacaactgatggtccgtttgttggagtgg ttcaactttgacccatccccccaacaatcggtggtgcttcaactattgataaggttgacg cagcacacctcagcatgtgacgtgctcgccgccatcggaggtctcactttcttatcccgt ctccgacccaaccttgaccccgacaccaagccccagtgtgatgtcataatagaccgattg ttacatgtcagcgagaaagatttatcgaaagcaagcaatgagaatcgaagatgtgtttac gggagggatgatcaagataatgacccccatgataccaccccccaagttgattacccaccg atggattacggatatttcacccaacgatcgatcaccaatgatgggaatccgccgaccccc ccactccccaccaacgaagcattgagatccatagaaaccccatgtttgcgtttccctgga tttctatggcacacattaacaggaacggaccggcacgtgctgacatcaacttgcgcttct ctatgctcaccaagtccacacctcgtacggaacgcgtgtgccttcctactcgatgttatt ttcagggacttccccgccgagatatttctacaaagaccttcgataactcagacgctgctc acccttataagtgcgcgccccggtggtcaattaatgacgagttcgttggaatgtttgcgt gcgttggccgagggtttggtatcgaggctgaatttctttcaagatcccgacatgtattgc cctcgacaaggccttccttttcactgtgagagtcgtaacggtagccaggggtcaagggtc aacgatagcgaggggtcaagggttgcctcgttgacaggaagtgacatcatatctcgatct gaggccgaggggtcagtgagagttgagaggattgggggggatgggagggaccatcaatct tcttcatctgggagcacctcccacatgtcgcacaacaacagcagcaacaactcacaagga ttcaatagcttggtttgggattcaagtattggggacgataatgatgtcgttgcattacaa cgaacgcaacttaatacgccacagttttgcatcgctagtttggaagccacactgccttca ttgaagacggatagcacgagactggcgttgaatattatacagacaatatctccgcttatt caacttctcggcaaaactattcgtgccgataaattatggatcgacgcgtctaatgttgca caaaatattcaaagcaagttgtgtggattacttgagacattgggagatgtgttgatgtat cactaccatatgagtgacaacacaacacagtggacgaacaaacaatggtcgatacatgaa ggtcgttcacatcgtgttgttttccaaacaatggctgggtttgtggtggacgtgctgcaa gctgtggtacctgtggaacaggcaaacaaggtgttgaagacaagtttatcgcaagcatta tacgtggttgcaatcgacgagtgcatgaggctgggatacgatgaggtcacagatatagca ttggaatatttaaaggaagccaaccatgataaatatgaagtggttgagaggttgaggaag gtggtggcttcattcacacacacccacatgttgcaccaccaatataaggagttacaacaa gcaagcgacatcaaccttgagttgatcgagataattgaaagtagtttgcttggtttagac caccgaccccaccctacgcatataacgagggtggttcatgttatttccaaggttttccat gataatgggacagaagacaagatacgaacaacaagcaaacaaatattgctacgtttattt gcacacccattggtgcaagtacgcagatacacatatgaggaatgtttgaatattacgcgg attagtgtgaatgttacatcagctgcggaacaccatggtcatacacaaagctatgcatgc aggttcttgttggacagtgaagtattatacgaggtatgcacgcatgggttggccgatact tcacgtttggtatcttaccccgcacaagaacttatatccgcgttattacacggtcgtgtg ttgatgggtgaaggggtgtgggggcaactaaggggggcgatggatggggtgttacccgtt cttcaggccttcagtggtgaatcagagattctgtgcacctccataaccacctacatcgcc caatcacattctaatgatacaaatgcattgaaatcatgggttcgagggttgatgttgaaa catagggagtcgaggggggtcgctgcaaacaaactacaacgaatgtttaatatcaaaata tcaggacttaccgacctcctaataatggacacccccctctccctgatcccacgtgatgag ttggatagcttccgcatccgtcgttgtatcttccaggaaggtgcggttgttcgtatgttg tccgtgttccggtcatcgaccactgaaccaaccacacgcataggagcgttgcgccaactt tccaccatgctcgaggatccaaccctgcaccccgcgtttatacaacacaacggtctcgat tcaatcactcataaactgaaacaactatccgctgatgatgtcacaatcctcattgatgat gtcagacccgctgttagcgcttgcatcacgatcatgaagttgatcatgagacatgatgct gcttcacgtgataagttgtctcatgatcatggtataatcatgaggctgatccacttagcc aaccttaccaggctaaccacagccatgatacacaacgtatgtgtggtgttggccatgctt gtattccatgatgtgttgagggaacatgttcgaacacccaaccaaccaatgcaagttgtt gaactaagtttgccgtcagctgtagttgcgagataccagatccccttcctgtgcccgtcc catcacaccgtaagcatccatcgtactctaactcaccccccacccaccatgcatgatgag gtggcaacaggaccagcgtcctcggcgttgcgcataggatggaacatagccgcacacggg aaccacgtcccaaccacttgtaatcatgccactactaatatggatgatgacaacacaatg gacttttgtctcactgaatccgatcgaacaatgcttgtattctcacaccccgatactgct acgaacttacttgaattattcccggccaccgccgatcgaggtcaacaccccaaacgatct aaacaacaaacaatattattagaatgttggttgagtttcatgtacgcgctatctttccat acagatggacaacttaatatactcaagttaagagatatatttgatgtcctcgttgaattg tttaaatcaaagacaaacgcccaacttacgttgaacataataaggaacctttgttttcat tcaccaagtaagaacaggatcagttcaaacgattcagtggttgacgttctattatcaaac ctcgataataaacaaacacgaatggattcgtcaatcgctctgcttactttgttgtgtaat aatcaaaaggcaaaggtccatcttaaaggagcgggtctaggcaaacgcgttcaacattcg ttggataaactatcactagagggctgggagggtgagaagaaatataagaggtgtttagag gatgtgttggtcattatgacggggtga

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