Ciona intestinalis (yellow sea squirt): 100175680
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Entry
100175680 CDS
T01056
Name
(RefSeq) putative neutral ceramidase C isoform X1
KO
K12349
neutral ceramidase [EC:
3.5.1.23
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00600
Sphingolipid metabolism
cin01100
Metabolic pathways
Module
cin_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
100175680
Enzymes [BR:
cin01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.23 ceramidase
100175680
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ceramidase_alk
Ceramidse_alk_C
Adeno_E1A
Motif
Other DBs
NCBI-GeneID:
100175680
NCBI-ProteinID:
XP_002121814
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All DBs
Position
12:2218951..2229951
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AA seq
836 aa
AA seq
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MDEETVPKVSKRKSRLFQFLILLVTVAIVATICGLVIYYVGVVGDGQGNTNEPALDSTSS
PILPTTDSATSPITSSNIFYIGAARTDVTGPVVQVNMMGYAHPEQVANGLHTRLYSRAFV
VADKELNTRVAFVSFDGGMTSQLIKLQVVKKLQEKHGDMFSERNVVISGTHTHSGPAGFF
QFLLFEITSLGHVEQSTTAFVDGITESIELANSRLELGKIRIGSGLVNEGNINRSPTSYL
LNPESERARYTHDTEQEITVLGFETLSGDPVGMLSWYPVHPTSMNFTNLLINSDNKGRAS
TLFEKMMRKPGETLGGQESFVAAFAQANLGDVSPRTKGPICFDTGLECEPLSSTCNGRSQ
NCTGFGPGKDMFDSTDIIARRQLDAAKGVYENATEVLDGPVSWVHQYVDMTSQSIKLDDG
TTANTCKPGMGYSFAAGCTDGAGAFDFVQGMTRGTAFWNTIRDTLAKFICTVEPPKEYYD
CHKPKPVLLPTGYMDIPYEWHPTTVDIQLLRIGQLVIAAVPGEYTTMAGRRLKEKIHMEA
ISQGMGENTKVVLAGLTNVYTHYITTPEEYVAQIYEAASTIFGPHTFQVYQEKFSDLVFP
LVSGNKDDVDLGPSPELKQANQSRIAPLPGPDKVPAGVNFGDIIDDVNATYSTDDVVVVK
FHAANPRHDMKLGSTYLEVERLVGRAWKTVYTDADWSTKFSWEEKNSIAPPADLTLFTTL
SDVVAEATGVRFDIDLARQLHESGVLFTGNDVNDDDVIAQEVRHRLLQNMWDQNVLRREQ
TNYADVTAVESYVTIEWDIPVDEASGTYRIVYHGDYMDVDGSITPFTGTTSEFDVA
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagagactgttccaaaagtttcaaaaagaaaatctcggctcttccaattctta
attttgcttgttactgtagcaattgttgctactatttgtggattggttatttattatgtt
ggtgtagtgggtgatggacaaggcaacaccaatgaaccagcccttgactccaccagttct
ccaatattaccaacaacagactctgctacttctccaattacttcatcaaatattttctac
attggagcagcaagaacagatgttaccggtcctgtagtacaagttaatatgatgggttat
gcccatccagagcaggtggctaatggacttcatacacgattatacagtcgagcatttgtt
gtggcagataaagagcttaacacgagagtggcatttgttagttttgatggcgggatgacc
tcacaactaatcaagcttcaggttgtgaaaaaactgcaggaaaaacatggagacatgttt
tctgaaagaaatgtagtgatttctggcacccatacacattcgggacccgctggtttcttc
caatttctattatttgaaataacctccctcggacatgtggagcaatcaaccactgccttt
gttgatggcattactgagagtattgaactggcaaactcaagattggagcttgggaagatc
agaattggaagtggtttggtaaatgaaggaaatataaacagaagtcctacgtcttatctt
cttaatccagagtctgaaagagccagatacacacacgatacagagcaggaaattacagtg
ctgggattcgaaacactttcaggagatccggttgggatgttgtcttggtaccccgtccac
ccaacaagtatgaactttacaaacttgcttattaattctgacaacaaaggcagagcttca
acactatttgaaaaaatgatgagaaagccaggggaaacactgggtgggcaggagagtttt
gttgctgcttttgcccaggcaaatttgggtgacgtttctccaagaactaaaggtccaatt
tgtttcgacacaggtttggaatgtgagccgttatcatctacctgcaatggaaggtcacaa
aactgcacagggtttggtccaggaaaagatatgtttgattcaacagatattatcgctcga
agacagctggatgcagcaaagggcgtttatgaaaatgccactgaagtgcttgatggtcca
gtgagttgggtacaccagtatgtggatatgacaagtcagtcaattaaactagatgatgga
acaactgcgaatacttgtaaacctggcatgggatatagttttgctgctggatgcaccgat
ggagcaggagcttttgactttgtccaaggaatgacacgcggcactgctttttggaacaca
attcgagacacccttgccaagtttatctgcactgttgaaccacctaaagaatattatgac
tgccataaaccaaaacctgtattgctaccaactggatacatggacataccatatgagtgg
caccctactacagtggatatacaattactaaggataggtcaacttgtgatagcagctgta
cctggtgagtatacaactatggcaggacgaagacttaaggagaaaattcacatggaagca
atcagtcaaggaatgggggaaaatactaaggtcgtgcttgctggcttaaccaacgtttac
actcattacatcacaacccctgaggaatatgtagcacaaatatatgaggcagcatccaca
atattcggacctcacactttccaggtctaccaagaaaaattctcggacttagtatttccc
cttgtcagcggaaataaagacgacgttgacctaggaccatcgccagagctaaaacaagcg
aaccaatctcgcatcgcacctttacctggccccgacaaagtgcccgctggggtaaatttc
ggtgacatcattgatgacgtgaatgctacgtacagcacagacgatgttgtggttgtgaaa
ttccatgcagctaacccaagacacgacatgaagttgggttctacgtaccttgaagttgag
agactcgtcggcagggcatggaaaacggtgtacacagacgcagattggtcgaccaagttt
tcttgggaagaaaagaattcaatagcgcctccagcggacctcactcttttcacgacgtta
agtgacgtggtggcggaggcgacgggtgtcaggttcgatatagatctggctcgccaactt
cacgaaagcggagttttattcaccggaaatgacgtcaatgatgatgacgtcatagcccaa
gaagtccgacacagattgttgcaaaatatgtgggatcaaaacgtgctgcgcagagaacaa
acgaactacgctgacgtcacagccgtcgaaagttacgtcacaatcgagtgggatatacca
gtcgacgaagcaagcggaacgtacaggatagtttaccatggtgactatatggatgtagac
gggtcaatcacaccgtttacaggaactacaagcgaatttgatgtagcttaa
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