Ciona intestinalis (yellow sea squirt): 100175684
Help
Entry
100175684 CDS
T01056
Name
(RefSeq) tryptophan--tRNA ligase, mitochondrial-like
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100175684
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cin01007
]
100175684
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cin03016
]
100175684
Enzymes [BR:
cin01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
100175684
Amino acid related enzymes [BR:
cin01007
]
Aminoacyl-tRNA synthetase
Class I (G)
100175684
Transfer RNA biogenesis [BR:
cin03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100175684
Prokaryotic type
100175684
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
Chromo_MORC2_6th
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
100175684
NCBI-ProteinID:
XP_026690654
Ensembl:
ENSCING00000002559
LinkDB
All DBs
Position
6:221597..227190
Genome browser
AA seq
338 aa
AA seq
DB search
MRNLSSLRCLFCAYPKNKFLSKYFSNQVHTEAEQIIKEKRVIFSGIQPTGIPHIGNYLGA
LKHWVELQNESDDIYYSIVDLHSLTIPKSRDFMQDSIFNITACLLACGVDPDTTVLYQQS
SVPEHTQLSWVIGCIVPVNRLKHLPQWKVKYMCNVFVLFFLQMPFQKLGCLQIKLLIFSL
LFTDPTFARIRDFRDPRVKMSKSSPSINGRIELTDTDSEIRLKIKRAVTDSTSQVTYDPE
NRPGVSNLIQIHCGMCDITPEKACSLACNMDTGKYKSLVADAVIEQLSPIREKYLKIRKD
EVKLKMVLDHGAKRARVVAKSNWESIRELLGINIAEIS
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatctatcttcacttcgttgtttattttgtgcataccctaaaaacaagtttctt
tccaagtatttctccaaccaagttcacacggaagcagaacagatcatcaaagaaaaacgt
gtcatattttctggtatccaaccaacggggattccccacatcggaaactacctcggagca
ctaaaacattgggtggaattacaaaatgaatctgatgatatttattacagcattgtagat
ctacactcactaactattcctaagagtagagacttcatgcaagacagcatatttaacatt
acggcttgcttacttgcatgcggtgttgatcctgacacaacagtgttatatcagcaatca
tctgtacctgaacacacacagttatcatgggtgattgggtgtattgtgcccgtcaatcga
ctcaaacatttgcctcaatggaaggtaaaatatatgtgcaacgtttttgttttatttttt
ttgcaaatgccttttcaaaagctggggtgtcttcaaataaagttattaatattttcactt
ctctttacagatccaacttttgctcgcatcagagattttcgtgaccctcgcgttaaaatg
agcaaatcttcaccaagtattaatggaagaatagaattaaccgacacagattcggaaatt
cgtttaaaaatcaaacgagctgtaactgattctacttctcaagtaacttatgatcctgaa
aatagaccgggtgtttcaaaccttatccagattcattgcggaatgtgtgacattacccca
gagaaggcatgttctcttgcatgtaatatggacactggtaaatacaagtcactcgttgct
gatgctgtgatagaacaattgtctccaataagagaaaaatatcttaaaattcgaaaagat
gaggtgaaattaaaaatggttttggatcatggtgctaaacgtgcacgagttgttgccaag
tcaaactgggaatctatacgagagttattgggaattaatatagcagaaatttcatga
DBGET
integrated database retrieval system
