Ciona intestinalis (yellow sea squirt): 100175723
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Entry
100175723 CDS
T01056
Name
(RefSeq) LOW QUALITY PROTEIN: N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase-like
KO
K00742
N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase [EC:
2.4.1.150
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00601
Glycosphingolipid biosynthesis - lacto and neolacto series
cin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
100175723
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cin01003
]
100175723
Enzymes [BR:
cin01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.150 N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase
100175723
Glycosyltransferases [BR:
cin01003
]
Glycan extension
I antigen
100175723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Branch
SH2
Motif
Other DBs
NCBI-GeneID:
100175723
NCBI-ProteinID:
XP_002128349
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Position
2:complement(801133..806409)
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AA seq
482 aa
AA seq
DB search
MVSLTKCSLAVYLTLLVVVVYQLYYQHLEVHRDVANIASNIHLPARHVGSTKAAPTQVVP
ANEDTTLPAHVTNTFSETEATFSSTNFPLKEITTAGKRETINYETCNRLLRGETDGDYLV
RNADTTSDEQIYLAASENCTEFRRKYRFMLPEYQVHEEEKNFTLAYSILAHDRIQQLALL
LSAIYTPYNVYCLHIDAKSAPATKLAATAISECFDNVFMATRMERVIYAHVSRLEADLNC
FKDLLDFQPQQYRWKYLINLCGQDXPLRTNMEIIEQMKHLKNTNLILGCKAHDKLTLRRT
QVVYRLENATDPSQPAKMRETDIEHPPPPYNMTINKSLAYNFFTRDFIDWVIYKTNKSKA
LLEWSRDTYSPDEQYWMTLNNEPDAPGGKPGFQCWTLVRYIKWMYKVDQKECLGYSNHGI
CVFNTSALFSFTKRNELFVNKLDIRYDVDVVHCLRSWLDERRRGGNKEGNPRREPLLPPW
LS
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggtttcgttgaccaaatgcagcttagctgtgtatctaacattgttggtggtggtggta
taccaactatattatcaacatcttgaagttcatcgcgacgtcgcgaatattgctagcaat
atacatttgcccgctaggcatgttggatccacaaaagctgcaccaacacaagttgtacca
gccaatgaagacacaaccctcccagcacacgtcacaaatacattttctgaaactgaagct
acattttcaagcacaaacttccctctgaaagagattaccacggccggtaaacgtgaaact
ataaactatgaaacttgtaatcgtttactgcgcggagaaaccgatggggattaccttgtt
cgcaatgcggatacgacttcagatgaacagatttatctagcagcgtcggaaaattgtacc
gaatttcgcaggaaatatcgttttatgttgccggaataccaggttcatgaagaagagaag
aacttcacacttgcttattcaatacttgcgcatgacagaattcagcaattggcattgcta
cttagtgcaatatacactccatacaacgtttactgtttacacattgacgcgaaatctgcg
ccagcgaccaagttagctgccactgcaatcagtgaatgctttgacaacgtgttcatggca
acgcgcatggaaagagtgatttatgctcatgtttcccggctggaagcagatttaaattgc
ttcaaagatttacttgactttcaaccgcaacaatatcgatggaagtatttaattaattta
tgtgggcaggattaaccgttgcgcaccaatatggagataattgaacagatgaaacatctg
aagaacaccaaccttattcttggctgtaaagctcacgataagttaacattacgaaggaca
caagttgtgtatcgattggaaaatgcaaccgaccctagccagcctgccaaaatgcgtgaa
accgatattgagcatccgccacccccatacaacatgaccatcaacaaaagtttggcgtac
aactttttcacgagagattttatagactgggtaatctacaagacgaataaatcaaaagcg
ttgcttgaatggtcacgtgacacctacagtcctgacgagcaatactggatgactttgaat
aacgaacctgacgcaccaggtggaaaaccaggtttccagtgttggacgttggtccgttat
attaaatggatgtataaagtagaccaaaaagaatgtttgggttatagcaatcatggtata
tgcgtgtttaatacatcggcgcttttttctttcaccaaacgaaacgagctttttgttaac
aaactcgacattagatatgacgtagatgttgtgcattgtctgcgctcctggttggacgag
agaaggagagggggaaataaagaaggcaatccaagaagagaacctcttctacctccatgg
ttgtcatga
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