KEGG   Ciona intestinalis (yellow sea squirt): 100175728
Entry
100175728         CDS       T01056                                 
Name
(RefSeq) eukaryotic translation initiation factor 2A isoform X1
  KO
K15026  translation initiation factor 2A
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cin03019]
    100175728
   03012 Translation factors [BR:cin03012]
    100175728
Messenger RNA biogenesis [BR:cin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     100175728
Translation factors [BR:cin03012]
 Eukaryotic type
  Initiation factors
   eIF-2A
    100175728
SSDB
Motif
Pfam: eIF2A WD40_Prp19 WDR55
Other DBs
NCBI-GeneID: 100175728
NCBI-ProteinID: XP_002129342
LinkDB
Position
Unknown
AA seq 578 aa
MAVELPQLVVRGANGLSLLKWKTDGTSEENKICDQKCRTTKFSNDGKLFAWCDMKQVHIM
EMGSGNILSSINQPRTFAMYFSPDAKLLCTWEQYAVTKDTPAGTPNFNIWNVSDGSCVHN
SIQKKVNGWRPDWLPGTTICGKLTGQSVQFYEDNDFKTAKHRLSIEKLEVFEVSPNIKPP
HRVACFVRGARGGPASVKIFQYPKFTTGDVVANKSFFKADTVSIKWNKRGTELLVTAAVD
VDTTGESYYGEQSLHFMSCTGETSIVQLSKKGPIYDSAWSPLSNQFCVVFGFMPAKACLF
SNKCNKTFEFGSTPKNECYYNPHGNLLILAGFGNLRGNIEVWDCCRHSQVSQFTAPDTTC
LEWCGDGCHFVTATTSPRLRVNNGYKLWHYEGGLLQTINFQNELNDVQWRPVPTGTYTAP
LVKLVTSKNLSNMISASKPASYVPPHARGKSSKAAEKFKLDEDEPIIQEPLSKSAQKNKK
KREGKKNKTPTNSSLSSEQQDVIQMAKYLLNDEAAQPTQPTQLAGEDKKIKSLRKKLQAV
EKLKKQQSEGKQLEKNQIEKLNTEDSIIEELKKLGVSV
NT seq 1737 nt   +upstreamnt  +downstreamnt
atggcggtggaattgccacaattagttgtgcgtggagcgaatggtttgagtttgttaaaa
tggaaaacggacggaacatctgaagaaaataaaatttgtgaccaaaaatgtcggaccaca
aagttttctaacgatggaaagttgtttgcgtggtgtgacatgaaacaagttcacataatg
gagatgggtagtggaaatattctatcaagtatcaaccaaccgcgaacattcgcaatgtat
ttctccccagatgctaaactactgtgtacatgggaacaatatgctgtaacgaaagacaca
cctgccggcacacctaacttcaacatatggaacgtatcagatggttcgtgcgtacataac
tcgatacaaaagaaagtgaacggttggagacctgactggcttcctgggacaactatatgt
gggaaactgacgggacaatcagtccagttttatgaggacaatgatttcaaaaccgcgaaa
cacagactgagtattgaaaagctcgaagtatttgaagtttccccaaatattaaaccccca
catagagtagcttgctttgtacgtggggcacgaggtggaccggcctctgtgaagatattc
caataccccaagttcaccacaggtgatgtggtcgctaacaaaagctttttcaaagcagac
acagtctccatcaaatggaacaagcgcggcacagagttgttggtgacggctgctgttgat
gtcgatactacaggggaatcgtattatggagaacaatcgctacatttcatgtcttgtacc
ggggaaacatctattgtacaactttccaagaaaggtcccatatacgactcagcatggtca
ccattatccaaccagttctgtgtggtgtttgggttcatgccagccaaggcttgcttgttt
agcaacaagtgtaacaaaacctttgagtttggttctacaccaaagaatgagtgttactat
aatccacatggaaacctgttaatactggctggcttcggcaacttgcgcggcaacatcgaa
gtttgggattgctgtcggcactcccaggtttcccaattcacggcaccggacaccacatgc
ttggagtggtgtggtgatggttgtcacttcgttaccgccaccacttcaccaaggctaagg
gttaataatggttacaagttgtggcattatgaaggtggccttttgcaaacaatcaacttc
caaaacgagttaaacgacgtacaatggcgaccagtgccaactggaacatatacggcacct
ttagttaagctggtaaccagtaagaatctatccaacatgatatctgcgtccaaaccagcg
agttacgttcccccacacgcgagaggaaagtcatctaaagctgctgagaagttcaagctg
gatgaggatgaaccaataatccaggaacctctttctaaatctgcccagaagaataaaaag
aagagagaaggaaagaagaataaaaccccaactaattcaagtctaagttccgagcagcaa
gatgtcatacagatggctaagtatctgctgaatgatgaagctgctcaaccaacacaacca
acacaacttgctggtgaagataagaaaatcaagtcattgcgaaagaaactccaggcagtg
gaaaaacttaaaaaacaacaaagtgaaggaaaacaactagaaaaaaatcagattgaaaaa
ttaaacacggaagattctataattgaagaacttaagaaactgggggtttcagtttaa

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