Ciona intestinalis (yellow sea squirt): 100175730
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Entry
100175730 CDS
T01056
Name
(RefSeq) coronin-7-like
KO
K18619
coronin-7
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cin04812
]
100175730
Cytoskeleton proteins [BR:
cin04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
100175730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_4
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
DUF1899
WD40
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Ge1_WD40
Beta-prop_IP5PC_F
Beta-prop_ELP1_1st
Beta-prop_IFT122_1st
eIF2A
Nucleoporin_N
VID27
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
B-prop_COPA_B_2nd
Beta-prop_SCAP
DUF4232
Motif
Other DBs
NCBI-GeneID:
100175730
NCBI-ProteinID:
XP_002128072
Ensembl:
ENSCING00000004409
LinkDB
All DBs
Position
2:4334477..4377051
Genome browser
AA seq
946 aa
AA seq
DB search
MHRFKSSKYKNGVAKVPKKELCITDVSVEAPVSYGNHVSCGAKFFVCNLGGAGGGKLGVF
GVDDCGRKGQHPMLAAHAGIITDIEFSPFYHDTFLSASDDSTVKIWKIPDSGVMNSGSYS
PASVFKGFKKRPEVLQHHPVAESLCALATGGEIKLLNMKQEDVALNCEVCSDTLQSIAWS
YDGKTIAATSKNKKLFIADPRVGQQVVETAAHGNHKDSRVICLGDSEKFATTGFTTSRSR
ELKAWDPRNLTSCLQTIEFGTSTGVLMPFYDADAKLIFLAGKGDSSLSILEVVDGTELIS
QASQTMLPDQSKGMGILPKLAVDVMSCEVDRLMQLCARQIVPVKIEVPRKSHRDFISELY
PDTDSDEIVLTAENWLSGTNGQRTKTSLDPSTRKSLRVSQNAPTVAAPAAPAEPTEPVEP
VEPAESAAQAAPAAEVVKNTTPTDTKKVASSSPPPPSESKLPAPEKKVEVEKPKPTATAV
VAKPFAGVRQSKFRHWTGTVLHPTTHITNIPKLNTSLSGSCDGFHINTERVAFPLSTPGG
HVAIWELSKIGRLPSSDPPSLQNTAAVTDMRWDPFNSHRIAVGLENGKIKVWEIPEGGLK
EVVSEESFSLSGHYNKVICVRFHPLASGILASASSDSTIKIWDLESQENCITLTGHEDEI
LNISWSSDGKYIASMCKDNKIRIYDPRSSTEPIKVATGSEGSSRGGRIVWACSDQLLISS
GFKSGAREIAVYDVTDMDRGQVESQDLGGSPSTLIPHYDEDSSTLFVTGKGDTTMHSFEV
SPTEPHLHQLNTFTSDKMHQGFLFLPKTTCDPRKVEFARAWRLSKTTLVPISFKVPRIKM
EYFQDDLFPETRDLRKPTMTSQQWLDGKNVQASKISVCPKDMKPLSEAPKEAPKARKYES
YDPSTYKTDEEKKEELLAAMSNRLDLDKELEQDTMEGVDEDEWDDY
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgatttaaatcttcaaaatacaagaacggcgtcgcaaaagtgccgaagaaagag
ctgtgtatcacggatgtctctgtggaagcaccagtgtcttatgggaaccatgtaagctgt
ggagcaaaattcttcgtatgcaaccttgggggagcaggaggtggcaagcttggtgtgttt
ggcgtggatgattgtggaaggaagggtcaacatcctatgctggccgcccatgcagggatc
ataacggacattgagttttcaccattttatcacgacacctttctctctgcttctgatgac
tcaactgttaaaatttggaaaattcctgactctggcgtgatgaattctggctcttattcc
cctgcatctgttttcaaaggttttaaaaaacgccctgaagtattgcaacatcacccggtg
gctgaatcactctgtgctttggcaacgggtggtgagattaagttattaaacatgaagcaa
gaagatgtggcacttaattgtgaagtatgcagtgacacattacagtcaattgcttggtct
tatgatggaaagacaatagcagcaaccagtaaaaacaagaagttattcatagcagaccca
agggttggccaacaggttgttgaaactgctgctcatggaaatcacaaggattcgcgagtg
atttgtctcggagattccgagaaatttgcaacaaccggattcactacatcaagatctaga
gaactgaaagcttgggatccaagaaacttaacaagttgccttcaaaccattgaatttgga
acttctactggggtactgatgccgttctacgatgctgacgcgaagctcattttcctggca
ggaaagggcgattcctcactctccatactcgaagttgtggacggtacagagttgatcagt
caagcgagccaaaccatgttgccggaccagagcaaaggcatgggcatcctaccgaagctc
gcagtggacgttatgtcgtgtgaggtggaccgactcatgcaactatgtgctcggcagatt
gtaccggtgaaaatagaggtcccaagaaagtcacacagggattttataagcgagctttat
cctgacaccgattcagacgaaatcgtattgacagcagagaattggttatccgggaccaac
ggacagaggaccaagacgagcctggatccgagtactcggaagtcgttacgcgtttcgcag
aatgcaccaacggtagccgcaccagcggcaccagcggaaccaacggaaccagtggaacca
gtggaaccagcggaatcagccgcacaagcggcaccagcggccgaagtagttaaaaacaca
acccctactgacaccaagaaagttgctagtagctcaccaccgccaccaagcgagagtaag
ctaccggcaccagagaaaaaggttgaagttgagaaaccgaaacccactgctactgccgtt
gttgcaaaaccctttgctggtgtccgccagtccaaatttcgtcactggacgggtacagtg
cttcaccccaccacccatataaccaacataccaaagctgaacacctcgttatcaggatct
tgtgatggtttccatatcaacaccgaacgtgtggcgtttcctctatccacacctggtggc
cacgtcgcaatatgggagttatcaaaaatcgggcgacttccttcttcggacccacccagc
ctccagaacaccgcagctgtcactgacatgcggtgggatccgttcaactctcacagaatc
gccgtaggtcttgaaaatgggaagatcaaagtgtgggagatacctgaaggaggtttaaag
gaagttgtttcggaagaatcattttctctttcaggtcactacaataaggtaatctgcgtc
cggtttcatcctctcgcatccgggatcctcgcttctgcatcttcggattccaccatcaaa
atatgggatctggaatctcaggaaaattgtataacactgaccggccacgaagacgagatt
cttaatatatcgtggagcagcgatggcaagtacatagcatccatgtgcaaagacaacaag
ataagaatatacgatcctaggtcttctactgaaccaataaaggttgccacgggttctgag
ggcagcagcagaggcggtagaatcgtgtgggcttgctcggaccaacttctgatttcgtct
ggttttaaaagtggagctcgtgaaattgccgtttatgacgtcacagacatggatcgcggt
caagtggaatctcaagaccttgggggatccccctccacattaataccacattatgatgaa
gatagtagcacactgtttgtaaccgggaagggcgataccaccatgcactcattcgaggtc
tcgccgaccgaacctcaccttcatcaactaaacaccttcacttcagataaaatgcatcaa
gggtttctatttcttcccaaaacgacatgcgaccctcgtaaggttgaatttgcccgcgca
tggcggctgagcaaaaccaccctggttccgatctcgtttaaagttccgagaattaagatg
gaatatttccaagacgacttgtttccggaaacacgtgacctgcggaagcctacaatgacg
tcacaacagtggctcgacggaaaaaacgtacaagcttcgaaaatcagtgtctgcccgaaa
gatatgaaaccattgagtgaggcacccaaggaagcaccgaaagctcggaaatacgaatca
tatgatccatccacttataagacagacgaagagaaaaaagaagagttgctggctgccatg
tcgaatagacttgaccttgataaagagttggagcaagatacaatggaaggagtggacgaa
gatgaatgggacgattactag
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