Ciona intestinalis (yellow sea squirt): 100175746
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Entry
100175746 CDS
T01056
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00061
Fatty acid biosynthesis
cin00071
Fatty acid degradation
cin01100
Metabolic pathways
cin01212
Fatty acid metabolism
cin04146
Peroxisome
Module
cin_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
100175746
00071 Fatty acid degradation
100175746
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
100175746
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cin01004
]
100175746
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cin04147
]
100175746
Enzymes [BR:
cin01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
100175746
Lipid biosynthesis proteins [BR:
cin01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
100175746
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of breast milk
100175746
Exosomal proteins of breast cancer cells
100175746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
100175746
NCBI-ProteinID:
XP_002129904
Ensembl:
ENSCING00000022360
LinkDB
All DBs
Position
Unknown
AA seq
726 aa
AA seq
DB search
MEGTTDSNGVVEQQTSSQEQESINAQQSASEEQQNNEQQESASEEPQVADPAVTEEQQVT
SEPTTAKGKANELEYNLVSVADLVDKQSVAVDGDDTIRASPLMKPGKPTAYLEKDVTTLH
EIFMRGVRESGNSPCLGHRPGAGQPYQWITYNEVLTKAQHFGSGLVHEGAKTQPEQFIGI
FSQNRVEWKITEQACNSFSMVVVPLYDTLGPQSITHIMTQCEIQIIVVDTNVKTKNLLAA
VKGGKFAVTLIITMETPDDEAKSFAESANVRLMTFEQVEEVGKNNLKEFVPPKPEDLHTI
CYTSGTTGLPKGVMLTHGNVVANISGVYAVGEKTFLGMSSSDVYISYLPLAHVFERLMAA
QMYFLGARVGFFQGDIKLLLDDVGELKPTIFAMVPRLINKIYDTVWAGVAQSTIKRFLLE
KALKSKLAKLERGIVTKNTIWDKIVFKKLQNRLGGKCRVMVTGAAPVSLEVINFMRAALG
VNFTEGYGQTESSAALSVSVPGDFFSGSVGTPVVCNMIKLVDVPEKDYYAKEGKGEVCAK
GPNIFVGYYKDPDKTKETLDEDGWLHTGDVGMWLPNGSLKIIDRKKNIFKLAQGEYIAPE
KIEGILTQCPAVAQVYIHGESLKASLIVIAVPDPDAMVTWCNGKGVSGGYEELCNNTDVK
KLVLEDMCALGRKRGLKSFELPKKIHLSPELFSVENELLTPTFKSRRPQLLHRYKAEIDE
MYKDLD
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaacaactgatagtaatggagtggttgaacaacaaactagcagtcaggaacaa
gaatctataaatgcacaacaaagtgcaagcgaagaacaacagaataatgaacaacaagaa
agtgcaagtgaagaaccacaagttgcagatcctgcagtaactgaagaacaacaagttaca
agtgaaccaacaacagctaaagggaaagccaatgaattagaatacaaccttgtatctgta
gcagatttagttgacaagcaaagtgttgcagtggatggtgacgacacaatacgagcgtct
ccactcatgaaaccgggcaaaccgacggcttatcttgaaaaagatgtgacgacgttgcat
gagatattcatgcgcggtgttagagaatcaggtaatagtccttgtctcggccaccgcccc
ggggctggtcaaccgtatcagtggatcacctacaatgaggtactaacgaaggcccaacat
tttggatcaggacttgtgcacgagggcgccaaaacgcaaccggaacaatttattggaatc
ttctcgcagaaccgagttgaatggaagataactgaacaagcctgtaactcattctcgatg
gtggtggttcccctttatgatactttgggtccacaatccattacccacattatgacgcaa
tgcgaaatccaaataattgtcgtcgatacaaatgtaaagacgaagaatcttttggcggca
gtgaaaggtggtaagttcgccgtgacgttgataatcaccatggaaacccccgatgacgaa
gcaaaatcttttgctgagtcagccaatgttcgtttgatgacgtttgaacaagtggaggaa
gttggcaagaataatttgaaggaatttgttccacccaaacccgaggatctccacacgatt
tgctacacaagcggaaccaccggcctacccaagggtgtcatgctcacacatggaaatgtg
gtcgctaacatatccggggtgtacgccgtaggagaaaagacattcctcggtatgtcgtca
tctgatgtctacatctcatacttaccactagctcacgtgtttgaacgactgatggccgca
cagatgtattttcttggggcaagggttggattcttccagggtgatattaaattactgctt
gatgacgtaggggaattgaaaccaacaatattcgctatggtgccgaggttgattaacaag
atatatgacacggtatgggctggagttgcgcaatcaaccattaaaagattccttctcgaa
aaagctttgaaatcaaaactcgcgaaacttgaacggggaattgttaccaaaaatacaata
tgggataaaattgttttcaagaaactccagaaccgacttggtggtaaatgcagagtgatg
gtaacaggggctgcccctgtgtcgttggaggtcatcaactttatgagggcggcgcttggc
gtcaactttactgaaggttacggacaaactgaatcgtccgccgccctctcggtatctgta
cctggagacttcttctctggaagcgtcggtacaccggttgtgtgtaacatgattaagctg
gttgacgtgccggagaaagattattacgccaaggagggaaaaggagaggtttgcgcgaaa
ggtccgaatatcttcgttggttattacaaggatcctgataagacaaaggagacacttgat
gaagatggttggttgcatacgggagatgttggaatgtggttgcccaacgggtcgttgaag
ataatcgaccgcaagaagaatatattcaagttagctcaaggtgaatatattgcaccggag
aaaattgagggaattttaacccagtgtccagctgtggcacaggtttatattcacggtgaa
agtttgaaagcatcgttgatcgtcatcgctgttcccgatcccgatgctatggttacctgg
tgtaatggcaagggggtcagtggtgggtatgaggagctatgcaacaatactgatgtgaag
aaacttgtccttgaagatatgtgcgcccttggtaggaagaggggactcaagtcgttcgaa
ctcccgaagaaaatccatctttccccggaattgttttcggttgagaatgaacttttgacc
ccaaccttcaaatctcgtcgcccccaacttttgcatcgatataaagcagagattgatgaa
atgtacaaagacctcgattaa
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