Ciona intestinalis (yellow sea squirt): 100175758 Help Entry 100175758         CDS       T01056                                  Name (RefSeq) nischarin isoform X1   KO K24095   nischarin Organism cin  Ciona intestinalis (yellow sea squirt) Brite KEGG Orthology (KO) [BR:cin00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:cin04990]     100175758 Domain-containing proteins not elsewhere classified [BR:cin04990]  Phox homology (PX) domain-containing proteins   Other PX domain-containing proteins    100175758 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PX LRR_4 LRR_8 LRR_9 LRR_NXF1-5 LRR_14 LRR_LRWD1 Motif Other DBs NCBI-GeneID:  100175758 NCBI-ProteinID:  XP_002123643 LinkDB All DBs Position Unknown AA seq 1228 aa AA seqDB search MDLKPETQVFINSVEQVEDYTEYTIEVHHNGFMWKIKHRYSEFRKLHNALRNHNPDLEKN LLPPKKIIGKMSTSFIDKRREELELYLQTLMSQKFSGGVPRTLGVFLDFHHYEVERLTQD LAKELFAIGDSVLAHGKMYVFTPLQLWAISQRLTAEKPKSDAENPEYDFGHVLDFVQKLR HLHIQCQRGFIKQSNIVAQELSFDLSLFRSLEQLTMDRCGPEQVRVVSCLRRTLNTLSIH HSLTTIQSVLIEEAHENLPTSEVDPASIWSKLVTADFSENEISEIDISVRLLVMVDFLDL SKNKISKIENLQYLSQLVFLDLSNNEIAEIELAHAKLGNVKTLNLSCNKLKSLEGLGKMY SLEVLDLSKNQINEIRSVDHVSKLPCLTKLSLQSNPISEEVDYRTKTLSRFGTRAGEILL DGVTSSQKELDTSFVLSAILQSRRASEGRQIHTDRGTSPGSGSPISKILVPRRVSRHQVL SAGVMSAPDRLSTFSATMTSSRAPLPHPNTPQQIASSSSIKSGLVTKPFASDFLQETHSS SSNAEEKAEDSDSSDNTHINFSAKPELDNVTTTPLATETINSPQAIPEISDPSPDLSEIA PPSKAPLAKEEEMSDLGTPTVDLISESETLFPSLPDDTLHPVPMAEASSLVQELKTDPVC IKASDNINLLLDQEPIHPDSVIPTNVDTSNTQVNAPTTTMVDETQTMRDTNTFKTENART NTNISNSVTTQTPPFPEPSNPITPPNSPFKPISTTSPMSRKSPIRISPSHTRSRSTGTFP PLSPALTPTLTPLKPIVPFEDPASLMNKAIQNRENPARNLISRLSDPSLAQNTATVSPYS RRTSSGRQHHRRFTTAPLLNMKLSSPAMLHLSHQPKSALLRYFRSSVMLEDEELLHITWC NTITQEDSDSNPTSCVFISSKAFYIVYDDRENPLEPDHQRSLNFKAFQAEKSLSYLKKDT FSLTNGLKQVSLGLSNLSLEIKDLSSGNFIKLLTRSTSINDLLIRGLLAAYGVDERSFLA AKSEGRDFEYQPGKVRFVFTNERTVSQLENSFAEYLGPYREQCTSMVFYTSAWLRTPAGI DPLFPGGEQSKYLDVLAPVSSSSAVQSNRISLDSNTMTDHMSPQTDVLSPNIPPKIAIGL AITAEYCFLFTETPSYRIIDAISPHDVAGIEVCDVSGYDVTISSCMTSWSLEFRDYAERE KTIEQLCKQYAMTIGGDLCIKITEATEK NT seq 3687 nt NT seq  +upstreamnt  +downstreamnt atggatttgaaaccagaaactcaagtctttattaactccgtggagcaagtcgaggattac acggaatatacaatagaagttcaccataatggctttatgtggaagatcaaacatcgttac agtgaatttaggaagctacataatgcgcttcgaaaccacaatcctgatcttgagaaaaat cttcttcctccaaagaaaatcattggaaagatgtcgacttcatttatcgacaagcggagg gaggaacttgagttgtatcttcaaactcttatgagtcagaagtttagtggaggtgttcca agaactcttggagtctttcttgattttcaccattatgaggttgaacgacttacacaagat ttagccaaagagttatttgcaatcggagattctgtacttgcccatgggaagatgtatgtc ttcactccattacagttatgggcaatatctcaaagattaactgctgaaaaaccaaagagt gatgctgaaaacccggagtacgactttggtcatgtgctcgattttgtgcagaagctacgt catttacatattcaatgccagagagggttcatcaaacaaagtaacatcgttgctcaagaa ttatcttttgatctttctctcttccgatccttggagcagttgacgatggatcggtgcggt cccgagcaagtgagagtcgtctcttgtcttcggaggactcttaacacactcagtattcat cactcgttaactacaatacagagtgttctgatagaggaagctcatgaaaatcttccaact agtgaagtagatcccgcttcaatctggtctaaactggttacagcagacttcagtgaaaat gaaatttcagagatagacatttcggtgagattgctggttatggtggattttcttgatctg agcaaaaacaagatttcaaaaattgaaaacttgcagtatctctcccaacttgtgtttctt gatctaagcaataatgagatagcggagatagagttggcacacgccaaacttgggaatgta aaaaccctcaatctgtcgtgtaataaactcaaatcattggaaggtttggggaaaatgtat tcactggaagtgttagacctgtccaagaatcaaataaatgagatacgatcagtcgaccac gtttctaagctgccctgccttactaagctaagtctccaatccaatcctatatctgaagaa gtagattaccgcacaaagacgttatccaggttcggcacacgggcgggggagattctactg gacggtgtgacgtcatcacaaaaagagctagacacgtcattcgtactctccgccatacta cagtcacgccgtgcgtcggagggccgacaaatccacactgatagagggacaagtcctggg agtgggagtcctatatctaagatattagtcccacgtagagtaagcaggcaccaggtgtta tctgctggagtgatgtcagcacctgaccgcctaagcacattttcagctactatgacgtca tcaagagcacctttgccgcaccccaataccccacaacagatagccagtagctccagcatt aagagtggcttggttacgaaaccgttcgcctcagatttcttacaagaaacacattcgtca agcagcaatgctgaagaaaaagcagaagattccgattcatcggacaatacgcatatcaat ttctccgcgaagccggaactagacaacgtaactactacaccgttagcaacagaaactata aacagcccacaggcaatccccgaaatatctgaccctagtccagacctttcagaaatcgca ccacccagcaaagcaccactcgccaaagaagaagaaatgtcagatcttggaacaccgacc gtggatctaatatctgaatccgaaaccttattcccgtctctaccagacgataccttacac cctgtgccaatggcagaagcttcttctttagttcaagaactaaaaaccgaccctgtgtgt attaaagcatcagataatattaatttattacttgaccaggaaccaatacatcctgattct gttatcccgacaaacgtggatacgtctaacacgcaagtaaatgcaccaactacgaccatg gttgacgaaacacagaccatgcgtgatacaaacacgttcaaaacagaaaatgctcgtact aatacaaacatctcgaattcagtaaccacccaaacccccccttttcctgaaccctcaaac cccataacgccccctaattccccctttaaacccatctcaaccacgagccccatgtcccga aaatcccccattcgaatcagcccctcgcatacccgcagtaggtcaacagggacattcccc cctctatccccagcactaacccctaccctcacccctctgaaacccatcgttccatttgaa gacccagcatcgttaatgaacaaagcaattcaaaaccgggaaaacccggcacggaatttg atctctcgtttatcggacccgagtttagcgcaaaatacggccacagtgtctccttactcc cgaaggacttcttccggaagacagcatcaccgtcgcttcaccactgctcctcttctaaac atgaagctttcctcacctgccatgctgcatctctcgcatcagccgaagtccgctctcctc cgctacttccggagctcagtgatgctggaagacgaagagctgctccacatcacttggtgc aacaccatcacacaagaggactcggactccaatcccacttcatgcgtcttcatcagttca aaggctttctacattgtgtatgacgaccgggaaaacccgctcgaaccagatcaccaaagg agcttaaattttaaagcattccaagctgaaaaatctctttcatacttaaagaaagacaca ttttccttgacaaacggcctaaagcaggtatctcttggtttgtcaaacctttcgcttgaa attaaagatctgagtagcggcaactttatcaaactactgacacgaagcacttctataaat gacctgctaattagaggcttgctggctgcgtacggtgtggacgagcgaagttttcttgcc gcgaaatccgagggtcgtgactttgaataccagccgggtaaggtccgcttcgtttttacc aacgagagaaccgtgagccagctcgagaactccttcgccgagtacctcgggccgtaccgc gagcagtgtacatcgatggtgttctacacatcggcttggctgcgaactcccgccggcatc gacccattgtttcccggcggagagcaatcgaaatatctcgatgttctcgcacctgtttcc agtagtagcgctgtgcaaagcaaccgcattagtcttgatagcaacacaatgaccgatcat atgtcgccacaaaccgacgtcttgtctccaaatattccccccaaaatagccatcggtttg gctattacagccgaatattgttttctctttactgaaacaccgtcatatcgcatcatagac gccatctcgcctcacgacgtggcgggcatcgaggtatgtgacgtcagcgggtatgacgtc actatctcttcctgtatgacatcatggtccctcgaattccgcgattacgccgaacgggaa aaaacgatcgagcaactgtgcaagcaatacgcgatgactatcggcggtgacttgtgcatt aaaataactgaagctaccgaaaagtga

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