| Entry |
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| Name |
(RefSeq) HEAT repeat-containing protein 1 isoform X1
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| KO |
| K14550 | U3 small nucleolar RNA-associated protein 10 |
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| Organism |
cin Ciona intestinalis (yellow sea squirt)
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| Pathway |
| cin03008 | Ribosome biogenesis in eukaryotes |
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| Brite |
KEGG Orthology (KO) [BR:cin00001]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100175808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:cin03009]
100175808
Ribosome biogenesis [BR:cin03009]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100175808
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
5:4937882..4955938
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| AA seq |
1754 aa
MTSLSEQLRRLALPESQVADTFDKRIPSLLFEPGVAATLDRDTFFGLGVNGLEELCLLDP
KFRDLFQQDLFSAQAKDTERTTQTKQFNKHLNEKIQSFLIRVCPYFLLKPATKCIEWLIY
RFHIHTFNTDDLLMCALPYHGTNLFVRTVQLLDVSHPTNKWCWLSQVKNEGVSLSNKNIA
THCTRDLAFLQFICNMLTNAYKVVQENPDWSMVVVLNFYTTTVMGVLQSPKISETLLSKL
MPSVLEGLKSSVMEHQASSVMILSQLSVKITFERKVLSNIIKSGLKNVSTKLEKVFLRAI
LLFSQNQEQFQNLPKKVILQLSSHGGFIQEIVEIYRSGRIEKIVQILVEVLVSNITDSDT
EEKIWKTNIEVLTRFVQDLDLTVNLQLLLMRLLVENFTSTQSDKKSQKFLLFGKLLGQLQ
RKFPLSFDKVISEFFSREDVDKTTSGLLLSIFGASAKHQLIHDSSVSVAIGLLHPEDSVR
SQALRHLSDSLFKDPTSEVVRFSQDNVIRILGLDDSPLVVEAALQLLRKHVDLFKDDHIE
VSNTLVNLFFSKISIPDWKKAVQVAAQVLTVLSSAVPDENNVVSMRTTAAVLHILLMSLT
EKGWSTLAGNILKSDFCQKNSFFEAIRVAVLNKGKASQDNKVSAKFFHDLLCVVEQISDC
ENTQSSSAVFYFLCTIGVDDLELLTIICNSLSQKSANLKHKSSSDLSLNDGFYDLLQQPE
TPDRDIISLHFDTLRKFLESVVSLKSDISIPSFPQLGTLLQNAKRLDLTTPSKISLLTKT
FLSLLNLSESAKTGYENDEKLKSRITASVNSLISLFLNEVLRSQSLLDFLPIFLCEEFIN
PCLSSPVTCLQTLNILKVFLHATMNKVPAKATIDASHPILPCLLLLCSSNHHNIRRINME
SIQCVSSMKTNPVSSLMVHLTKHAEELTSDPEYILQCFANYFNEKNKPAIKKSRHGLLKT
LVQNMVNESAVSKLGVAFMTRCINKVDPFHFDPLLPLVTTFVDQSNVRTLDENEALLTTE
WLQKLTPDSLNETLKRELFFKVLTFQTEDKSSYLPQNVVFNLITKPFYTSLSDEIKQQLI
STLLDIGQSTANPDVAKMVFKVFKVIPLRSNYIIKELKKSFPSIDTKSTAPSGVIAAKRA
RLSKSTSSESGEVSETETPTWKRMIVLLEVLQHKKKIIKPKLLVAHLFTALNWMIDLQTG
NDVIDYGTQLVLGALHNVFMIAKSKLGAKDDTDIRNSLRVELLVKCIQTSGNTQTCQHAV
VLLAEAASICPEKLLHSVMSIFTFMGSNLLRRDDSYSFQIITKTIHTVVPALLQHMESAT
SGISKNTVTDIIRVFVDALPHIPPHRRLVVFEELINTLGGNEYLWQTLLLLVASRANKIT
KTSQEDEQDILSGSEEDVFLPSTVDALMEVCSSVSNLFPDHLQLESMVRMLNFISLVPDE
NDPKQKIDLNLPNLIDVPKQSTSHLRRLHLAVVSFASHLLSLEGGISNSFKLEKSMEHDA
AENATKMLTKFQSLLETALSYLSQTTTAVSNTHDDMTSRYYRTLQNRLNSLLDKINNLLP
SDTFMLVVSSILHEQSSNTTVHKVIELFNDRVAHTKHTLTPDQENVLLHISRQLIVLCGD
HGTDNHGMRAVAYTGLRHVARMCGIGCATHLIPILSMICDITKEKQPPIQVISSAMLCLG
ELFSTLKAHCISHLPSIAPCHCDASSPIKIREKLPHDGMYIISLSEVSRHLTTFHQSLPG
WVYFRVDLCFTCCS |
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| NT seq |
5265 nt +upstreamnt +downstreamnt
atgacttctttatcggagcaattaagacgtcttgcgttgccggaaagtcaggttgctgat
actttcgataaacgaattccttcattgttatttgaacctggtgttgctgccacacttgac
agagatactttcttcgggttgggtgtgaatggattggaagagctgtgtctcctggacccg
aaatttcgtgatttattccaacaagaccttttcagtgcccaagcaaaagacacagagagg
acaacccagactaaacaattcaataaacatcttaatgaaaaaatccagagtttcctgatt
agagtgtgtccttatttcttgctcaaacctgcaacaaaatgtattgaatggttgatatac
agattccacatccatacattcaacacagatgatctgctgatgtgtgcattaccatatcat
gggaccaacttatttgtgaggacggtccaactacttgatgtatctcatcctactaataag
tggtgctggctctctcaagttaagaacgaaggagtttcattgtccaacaaaaatattgca
acacactgtacaagggatctcgcctttctacagtttatttgtaatatgctgacaaatgct
tacaaggtagtgcaggaaaatcctgactggtccatggtagttgtcctaaatttttacacc
acaactgtgatgggtgtgttacagagtcctaaaatatcggaaacccttctttctaaactg
atgccttcagtgttagagggtctcaaatcatcagtgatggagcatcaggcatcttctgtc
atgattttgtcccaactatctgtcaagatcacattcgaacggaaagtactgtccaatatt
atcaaatctggtttaaaaaacgtttcaaccaaactggaaaaggttttcttgcgtgctatc
ttgctgttttcgcagaaccaagaacagtttcagaatttgccgaaaaaagtaatactacag
cttagttctcatggtggtttcatccaagagatcgtggaaatatatagaagtggccgcatt
gagaagattgttcagatcttggtggaggttcttgtatctaatatcacggactcagatact
gaagagaaaatttggaaaactaacattgaagtattgacacgatttgttcaagatcttgat
ctgacagttaacttacagcttcttcttatgagattactggttgagaatttcacttcaact
caaagcgataaaaagtcccaaaagttccttttatttgggaaacttctcggccaactacag
cggaaatttccgctctcgtttgacaaagtgatctctgagtttttctcgagggaggatgtt
gataaaacaacatccggactccttctctccatcttcggggcatccgcaaagcatcagttg
atccacgatagcagtgtgtctgttgcgatcggtctcctgcatccggaggattctgtccga
tcccaagctctgcgtcatctttctgactcattattcaaagacccaacttcagaggttgtg
agattttctcaggacaacgtgatccggattctcggacttgacgactctcctcttgttgtg
gaggcagctttgcagttactcagaaaacatgtagatttattcaaggacgatcatatagaa
gtttcaaacacattggttaatctgttcttctctaaaatatcaattcctgattggaagaaa
gctgttcaagttgctgcacaagttttgacagtcttatcttctgctgtaccagatgaaaat
aacgttgtttctatgcgaactactgcagcagtgttgcacattctgctaatgagcctcaca
gaaaaaggatggtcaacactggccggaaatattttaaaatctgatttttgtcaaaaaaat
tcgttttttgaggcaattcgagttgctgttctaaacaaaggcaaagcctcacaagacaac
aaggtctctgcaaaatttttccatgaccttctttgcgttgtcgagcagatatcggactgt
gagaacacacagtctagcagtgctgtgttctattttctctgcactattggagtagatgac
ttggaactccttaccataatttgcaacagtttgtctcaaaagtcagccaacctgaagcat
aagtcttcgtcagatctgtcacttaatgatggtttctatgatcttttacaacaacctgaa
acaccggatcgtgacatcatttccctccactttgacacgctacgaaaattcctggagtcg
gttgtttctttaaaaagtgacatttctattccatcttttccccaacttggaactttgctt
caaaacgcaaaacgactcgacttaacaaccccgtccaaaatttctctcctaactaaaact
tttctatctctcctaaacctctccgagtccgctaaaacaggatacgaaaacgatgaaaaa
ttaaaatctcgcatcacagcttccgtcaatagcctcatcagtctcttcctcaatgaagtc
cttcggagccaatctcttctggacttcctccctatcttcctttgtgaggagttcattaat
ccttgtctctcttctccagtaacctgcttacaaactttaaacattttgaaagtttttctt
cacgctacaatgaacaaggttccagcaaaggccaccattgatgcctcccatccgatcctt
ccatgtcttctcctcctctgcagctccaaccaccacaacatcaggaggatcaacatggaa
agcatccaatgcgtttcttccatgaaaactaacccagtgtccagtctcatggttcatctc
acaaaacatgcagaggaattgacgtcagatcctgaatatattctacagtgttttgccaac
tatttcaatgaaaagaacaaaccagcaatcaaaaaatcaagacatggattgttgaaaaca
ttggtgcaaaatatggtcaatgaatctgcagtatcaaagctgggagttgcgtttatgact
cgatgtattaataaggttgacccttttcattttgaccccttgttgccattggttactact
tttgtcgaccaatcaaacgtgagaacactcgacgaaaacgaagctctcttaaccaccgag
tggttgcaaaaactcactccagattcattgaacgaaactttgaaacgagaattatttttc
aaagttctgacgtttcaaaccgaagacaaaagttcctatttaccacaaaatgtggttttc
aatttaatcacgaaaccattctacacatcgttatctgatgaaataaaacaacaacttatt
tcaacattacttgatattggccaatccactgctaaccccgatgtcgctaagatggtattt
aaagtttttaaggttataccattgaggtcaaattacatcataaaagaattgaagaaaagt
ttcccatcaattgacaccaaatcgactgcaccttccggtgttattgctgcaaaaagagct
cggctaagtaaatcaacaagttcagaatctggagaagtttctgaaacggaaactccaacc
tggaagagaatgatcgttttgctcgaagttcttcagcataagaagaaaattatcaaacca
aagcttttggtcgcacatctctttactgccctcaactggatgattgaccttcaaacagga
aatgatgttattgattacggcacacagctcgtactaggagctctacataatgttttcatg
attgctaaatcaaaacttggagcaaaagatgacacggatataagaaacagtttgagggtt
gagttattggtgaaatgcattcaaacatcaggcaacacacagacttgccaacatgctgtc
gtactgcttgctgaagctgcttctatttgcccggagaaacttcttcacagcgtaatgtcc
atcttcacgttcatgggaagtaacttgctgcgtcgtgatgactcgtattcgtttcaaatt
attacgaagacaattcatactgtagtacctgctctgctacagcatatggaatcagccacc
agtggtataagcaaaaacacagtgaccgatataattcgtgtgtttgtggatgctctgcca
catataccaccacatcgaaggttggttgtatttgaagaactgatcaacacattaggaggg
aacgagtatttgtggcaaaccctccttctattggtggcaagtcgtgcaaataaaattact
aaaacgtcccaagaagatgaacaggacatcttgagcggatcagaggaagatgtttttctc
ccaagtacagtggatgctctaatggaagtttgctcctccgtttccaacctcttccctgat
catcttcaattggaatccatggtccggatgttgaatttcatctcgctcgttcccgatgaa
aatgatccaaagcagaagatcgatctcaacctcccaaacctcatcgatgttccgaaacaa
tctacttcccatcttcgacgtttgcatcttgctgtcgtctcgtttgcaagccatctcttg
tcactagaggggggtatttcaaactcgtttaaactcgaaaaatccatggagcatgacgca
gcagaaaatgccacaaaaatgctgactaagtttcagagtcttttagagacggctctctcc
tatctatcacaaactacaacagctgtatcaaacacacacgatgatatgacaagcagatat
tacaggacactacaaaacagactcaactctctgcttgataagataaacaatctacttccc
tctgataccttcatgctcgtagtaagtagtattctacatgaacaatcatccaacactaca
gtgcataaagttattgagttatttaacgacagagttgcacacactaaacacacactgacc
cctgatcaggaaaatgtgttgcttcatatttctcgtcaactcattgtgttgtgcggagac
catggcaccgacaaccatggcatgcgtgccgtggcttacacaggtctgcggcacgtagca
cgaatgtgtggcatcggatgtgccacgcacctcattccaatcttatccatgatatgtgac
atcacaaaagagaaacaaccacctatacaggttatatcatctgccatgctttgtttgggt
gaattattcagcacattgaaagctcactgcattagtcacttaccaagcattgccccatgt
cattgtgatgcttcttcaccaatcaaaatcagagaaaagttaccacatgacggcatgtat
attatcagcctatcagaagttagtagacaccttaccacatttcatcagtccttacctggt
tgggtttatttcagagttgatctctgcttcacctgctgctcttga |
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