Ciona intestinalis (yellow sea squirt): 100175811
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Entry
100175811 CDS
T01056
Name
(RefSeq) LOW QUALITY PROTEIN: exocyst complex component 3-like
KO
K06110
exocyst complex component 3
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100175811
Membrane trafficking [BR:
cin04131
]
Exocytosis
Tethering complex
Exocyst complex
100175811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec6
L51_S25_CI-B8
EXOC6_Sec15_N
Exo84_C
Motif
Other DBs
NCBI-GeneID:
100175811
NCBI-ProteinID:
XP_002124724
Ensembl:
ENSCING00000005296
LinkDB
All DBs
Position
14:4570400..4581978
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AA seq
737 aa
AA seq
DB search
MAAKQLVNLSKHMRELRLHLCQKSPSSQGVRDFVEQHYVSVKTANPKFPIMIRECSQVEP
KIYARYDIKDISARHRQLATAMXNLKHIFGVPEEVAKARDLIKEGQLLQAHKVLTDLEAS
RDNLLYEQHKLDNQSESDIKQLQAYFSEAVVLSDELGEALWKVLSKALMTVRKDSTSLVT
VLRIVEREQRTDTKLMEQESNSGFLPPGRPKRWREKAMETLKRAVEDKVDSDVYDTREAD
KMWLVRHLEILRKNVLDDLRVVKFLCVPCFPTTYNIFEQFVHWFHLALTNHLQNIISEGL
EGNEIISLLTWLNGYTGKDLMGHIELASTLDTNKLPPLLDDSVSERLMQSYFETTQTNML
SWTSKSLEQDAADWMRDEEPETDVDGYYRTSLPVILFQMIQQTIQVAQTISDTLKQRVLS
VCIEEMNKFVRSYAEAIVSYKEEHFKDRELPHYYPLYMVAATNNCEAFSDFATKLERENQ
AKSPSDENEDGENPFAEKESLAAQFCREMDNVAKASCGFLLDEVFIDLKPHIDSLFQRGW
LNDRTAIDTICVTIEDYYTDYVHLKRRFFDWIMMEAERRIVVEYLRGALGRRMKLNNASD
RMKAGEKLLQEQQMLSSLFRKLAASDANAISPCEALIPIAEVIRLQDKTMMPLELSGLVN
KYNDATVDQMQALLAMRGDFSATEAREMAIEAAEAIEVKNPRKESIYSLAATPTGSLSAP
QPTANIINQSIFSRFNL
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaacaacttgttaacttatcgaaacacatgcgtgaactgaggcttcatctg
tgccagaaatcaccatcaagccaaggtgtcagagactttgtggagcaacattatgtgagc
gttaaaacagcaaaccccaagtttcctatcatgataagagagtgcagtcaagtggaacca
aagatttacgcaagatatgacatcaaagacatcagtgcccgacatagacaactggccact
gccatgngaaaccttaagcacatatttggcgtccctgaagaagttgccaaagctagggat
cttattaaggaaggacaattgctgcaggcccacaaagttctcactgacctagaagcttca
cgtgacaaccttttatacgaacaacacaaactcgacaatcaaagtgaatccgatatcaaa
caacttcaagcttatttttcggaggccgttgttttatctgatgaactgggagaagctttg
tggaaagtgctgagtaaggctctgatgactgtgcggaaagattcaacgagtttggtcacg
gtgttgagaattgttgaacgagaacaaaggacagatacaaagttaatggaacaagaatcc
aactctggctttcttccaccaggaagaccaaagagatggagggaaaaagcaatggaaaca
ctgaaaagggcagttgaggataaggtagatagcgatgtctacgacactcgtgaagccgac
aagatgtggttggtccgccatcttgaaatattaaggaagaacgtccttgatgatcttcgt
gtggttaagttcctatgcgtcccatgtttcccgactacttacaatatatttgaacagttc
gttcattggttccatctcgctttaacaaaccatcttcaaaacattatcagcgaaggtctg
gaaggaaatgaaataatttctctcctcacttggcttaatggatatacaggtaaagatttg
atgggccatatagagttggcatcaaccttagacacaaacaaacttccccctctacttgat
gattctgtcagtgagaggttaatgcaaagttactttgaaaccacacaaaccaatatgtta
tcatggacaagcaagtcattggagcaagatgctgctgattggatgcgagatgaagaacca
gagacggatgttgacggatattaccgaacctcactacctgttattttgttccagatgatt
caacaaaccatacaggtggctcaaacaatatctgatactttaaagcagagagttctcagt
gtttgcatcgaagagatgaataagtttgtgcgttcttatgcagaagccattgttagctac
aaagaggaacactttaaagaccgtgagcttcctcattactacccattgtacatggtggcg
gcaaccaacaattgtgaagctttctctgactttgccacaaagttggaacgcgaaaaccaa
gccaagtccccttctgatgaaaatgaggatggggaaaacccctttgctgagaaagaaagt
ctagcagcgcaattctgtagagagatggacaacgtggcgaaggcttcgtgtggtttccta
ctggacgaagtcttcattgatttaaagcctcacatagactcattgttccaacgcggttgg
ttgaacgaccgaacagccatcgacacgatttgcgtcacaatcgaggattactacacagac
tacgttcacttgaaacgacgtttctttgattggataatgatggaagcggaacggaggatc
gttgtcgaatatttgaggggagcgcttgggagacgcatgaagctgaacaatgcatctgat
cgcatgaaagcaggtgagaagttacttcaggaacaacaaatgctttcatccttgtttaga
aagctggctgcttcagatgcgaatgccatatcaccatgtgaagccctcataccaatagct
gaggtgatcaggttacaagataagacaatgatgccgcttgaactgtctggcttagtgaac
aaatacaatgatgcaacagttgaccaaatgcaagcgttgttggcaatgagaggagacttt
tcagcaactgaagcaagagaaatggcgatagaagctgctgaagcaattgaagtaaaaaat
ccgcgcaaagaaagtatttattcactcgcagccacaccaacaggatcactgtccgcccca
caaccaacagcaaatataatcaaccaatctatatttagcaggttcaacttgtaa
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