Ciona intestinalis (yellow sea squirt): 100175820
Help
Entry
100175820 CDS
T01056
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100175820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cin03019
]
100175820
03012 Translation factors [BR:
cin03012
]
100175820
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
100175820
Translation factors [BR:
cin03012
]
Eukaryotic type
Release factors
100175820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Motif
Other DBs
NCBI-GeneID:
100175820
NCBI-ProteinID:
XP_002127384
Ensembl:
ENSCING00000002292
UniProt:
F6PST3
LinkDB
All DBs
Position
14:4544477..4550821
Genome browser
AA seq
434 aa
AA seq
DB search
MAELETAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEYGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPGNGLVVYCGTIVTDEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDNKFGFIVMDGNGALFGTLQGNTRDVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETSVTLFITNDRPNVTGLILAGSADFKTELSQSD
MFDQRLQAKIIKLVDVSYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGK
FCFGVDDTLKALEMGAVETLIVWENLDTMRYVLKNHSTDEEKILFLRPDQEKDKTHFTDK
DTQVEMEMTESCPLLEWFANNYKKFGATLEIVTDRSQEGSQFVKGFGGIGGMLRYRIDFQ
SLEFNEDDDYFNDY
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattggaaacagctgcagatcgaaatgtcgagatttggaaaataaagaaactt
attaagagtttggaagccgcaagggggaatggtacaagcatgatatctctaatcattcca
ccaaaagaccaaatatcccgagtggccaagatgctagcagatgaatacggaacagcatcg
aatattaaaagcagagttaaccgactctcagtgcttggagccattacttctgtacaacaa
agattaaagctttataataaagtacccgggaatggactcgttgtttactgtggaaccata
gtaaccgatgaaggaaaggagaagaaagtcaacattgattttgagcccttcaaacctatt
aacacttcattgtatttatgtgacaacaaattccacacagaggccttaacagctttacta
tctgacgacaataagtttgggttcatcgtgatggatgggaacggagctttgtttggtacg
ttgcaaggaaacacgagggacgttctccacaagttcacagttgatttacccaagaaacac
ggcaggggagggcaatctgctttacgttttgctcggttacgaatggaaaagcggcacaac
tatgtgaggaaagtcgctgaaacatccgttactttattcatcacgaacgatcgacccaac
gtcacaggtctcatccttgctgggtcggcagattttaaaaccgaactcagtcaatctgat
atgtttgaccagagactgcaggcgaagataataaagctggtagacgtgtcgtacgggggg
gagaacggtttcaatcaagcgatcgaactttccaccgaagttttatcaaatgttaaattt
attcaagagaaaaaactaataggtcgttattttgacgagatatctcaagatacaggaaag
ttttgctttggagttgacgatacattgaaagcattggaaatgggggcggtggaaacacta
atagtatgggagaacctggatacgatgagatatgtgcttaagaaccatagcacagatgaa
gagaagattctgtttttgagaccagaccaagaaaaagataaaacccatttcactgataaa
gacacccaggtagaaatggagatgactgagagttgccctctacttgagtggtttgccaat
aattacaagaagtttggggcgacgttggagattgtaacggatcgctcccaggaaggctcg
cagtttgttaaaggtttcgggggaattggaggtatgcttcgttatcgaattgattttcaa
agtttagaattcaacgaagatgacgattatttcaacgattactga
DBGET
integrated database retrieval system
